Top 10 genes with highest correlation to Rv3900c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3537/kstD | (cc=0.5508) | info on Rv3537/kstD |
Rv1729c/- | (cc=0.4953) | info on Rv1729c/- |
Rv3762c/- | (cc=0.4834) | info on Rv3762c/- |
Rv0250c/- | (cc=0.4772) | info on Rv0250c/- |
Rv1059/- | (cc=0.4726) | info on Rv1059/- |
Rv2929/- | (cc=0.4714) | info on Rv2929/- |
Rv3429/PPE59 | (cc=0.4696) | info on Rv3429/PPE59 |
Rv3146/nuoB | (cc=0.4689) | info on Rv3146/nuoB |
Rv1870c/- | (cc=0.461) | info on Rv1870c/- |
Rv1207/folP2 | (cc=0.4518) | info on Rv1207/folP2 |
Correlation of Rv3900c/- with Rv3146/nuoB
Normalized LFCs for Rv3900c/-:
(description and provenance of datasets)
Rv3900c/- | Rv3146/nuoB | |
Fe_supp_jason_reseq | -0.406 | -1.318 |
low_pH_jason_reseq | 0.632 | -0.895 |
NO_jason_reseq | -0.352 | -0.63 |
B6_jason_reseq | -0.285 | -2.02 |
MHCII_jason_reseq | -0.876 | -2.204 |
Isoniazid02 | -0.226 | -0.303 |
Rifampicin4 | 0.544 | 0.533 |
Ethambutol3 | 0.946 | 1.094 |
Meropenem3 | 1.216 | -0.944 |
Vancomycin16 | 0.228 | 0.0 |
Rv2680_day32 | -0.763 | 2.143 |
H37Rv_KO_MarP | 0.679 | -0.08 |
hypoxia_3wks | 0.49 | 1.228 |
hypoxia_6wks | -0.077 | 0.528 |
glycerol | -0.24 | 0.669 |
cholesterol | -0.243 | 0.246 |
AJ | -0.439 | -0.913 |
Bibs02 | -0.631 | -2.215 |
Bibs02c | -0.878 | -0.887 |
BL6 | 0.272 | 2.686 |
BL6a | -0.105 | 3.008 |
BXD01 | 0.446 | 3.298 |
BXD010 | 0.597 | 3.288 |
BXD011 | 0.116 | 2.568 |
BXD03 | 0.236 | 2.99 |
BXD04 | 0.63 | 2.919 |
BXD05 | 0.225 | 3.2 |
BXD06 | 0.749 | 2.98 |
BXD07 | 0.413 | 3.309 |
BXD08 | 0.497 | 3.323 |
BXD09 | 0.7 | 3.314 |
CAST | 0.117 | 0.829 |
CCcont | 0.838 | 1.842 |
DS01 | -0.021 | -0.202 |
DS02 | -0.884 | -0.285 |
DS04 | 0.748 | 0.727 |
DS0c | -0.671 | 0.443 |
GP01 | 0.801 | 1.199 |
GP02 | -0.257 | 0.444 |
GP0c | 0.689 | 2.314 |
NOD | 0.094 | 0.381 |
NZO | -0.712 | 0.118 |
PWK | -0.196 | 0.155 |
H37Rv_KO_CtpC | -0.042 | 2.112 |
H37Rv_KO_CtpD | 1.454 | 3.386 |
H37Rv_KO_Rv1272 | 0.336 | 2.5 |
H37Rv_KO_SugABC | 0.8 | 2.905 |
H37Rv_KO_MbtN | 0.202 | 3.496 |
Trans05 | -0.034 | 1.803 |
macrophage_unactivated | 0.451 | -0.196 |
IL1 | 0.311 | -0.32 |
Rapamycin | 0.368 | -0.454 |
Tcell | -0.137 | -0.202 |
GMCSF | 0.214 | -0.536 |
IFNab | 0.339 | 1.288 |
IFNg | 0.0 | -0.016 |
IFNg_GMCSF1 | -0.647 | -0.487 |
Rv1432_day32 | -0.469 | -0.314 |
Rv1565c_day32 | -0.058 | -0.058 |
secA2_input | 0.177 | -1.083 |
delta_Rv3594 | -0.054 | 0.268 |
delta_Rv3717 | -0.736 | 0.409 |
delta_Rv3811 | 0.241 | -0.44 |
delta_Rv0954 | -0.261 | 0.735 |
PonA1 | -0.07 | 0.202 |
EccD1_KO | -0.582 | -0.783 |
EspI_KO | -0.884 | 0.137 |
PE35_KO | -0.137 | 0.0 |
PPE68_KO | -0.086 | 0.301 |
glycerol2 | 0.294 | 2.655 |
lignocerate | 0.203 | -0.298 |
oleate | 0.089 | 3.194 |
phosphatidylcholine | -0.057 | -0.199 |
acetate | -0.361 | 0.037 |
glucAc | -0.205 | 0.62 |
Rv0950ko | 0.109 | 1.236 |
Rv1096ko | -0.802 | 1.318 |
Rv3684ko | -0.098 | 0.491 |
delta_otsA_trehalose | -0.73 | 0.503 |