Top 10 genes with highest correlation to Rv3894c/eccC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3835/- | (cc=0.4942) | info on Rv3835/- |
| Rv3278c/- | (cc=0.4824) | info on Rv3278c/- |
| Rv3813c/- | (cc=0.4779) | info on Rv3813c/- |
| Rv3762c/- | (cc=0.477) | info on Rv3762c/- |
| Rv2430c/PPE41 | (cc=0.4635) | info on Rv2430c/PPE41 |
| Rv0930/pstA1 | (cc=0.4593) | info on Rv0930/pstA1 |
| Rv3529c/- | (cc=0.458) | info on Rv3529c/- |
| Rv0051/- | (cc=0.4536) | info on Rv0051/- |
| Rv0820/phoT | (cc=0.4525) | info on Rv0820/phoT |
| Rv3470c/ilvB2 | (cc=0.4522) | info on Rv3470c/ilvB2 |
Correlation of Rv3894c/eccC2 with Rv0820/phoT
Normalized LFCs for Rv3894c/eccC2:
(description and provenance of datasets)
| Rv3894c/eccC2 | Rv0820/phoT | |
| Fe_supp_jason_reseq | 0.182 | -2.636 |
| low_pH_jason_reseq | 0.303 | 1.788 |
| NO_jason_reseq | -0.578 | -3.079 |
| B6_jason_reseq | -0.26 | 0.638 |
| MHCII_jason_reseq | -0.243 | -0.194 |
| Isoniazid02 | -0.159 | -1.411 |
| Rifampicin4 | -0.333 | -5.902 |
| Ethambutol3 | 0.435 | -1.638 |
| Meropenem3 | 0.077 | -3.038 |
| Vancomycin16 | -0.069 | -3.573 |
| Rv2680_day32 | -0.238 | 4.269 |
| H37Rv_KO_MarP | 0.384 | -3.993 |
| hypoxia_3wks | -0.092 | -5.69 |
| hypoxia_6wks | -0.023 | 0.699 |
| glycerol | -0.196 | 4.839 |
| cholesterol | 1.401 | 6.0 |
| AJ | 0.376 | 2.269 |
| Bibs02 | 0.017 | 3.308 |
| Bibs02c | -0.267 | 3.603 |
| BL6 | 0.556 | 6.0 |
| BL6a | 0.353 | 6.0 |
| BXD01 | 0.126 | 6.0 |
| BXD010 | 0.343 | 6.0 |
| BXD011 | 0.429 | 6.0 |
| BXD03 | 0.61 | 6.0 |
| BXD04 | 0.946 | 6.0 |
| BXD05 | 0.436 | 6.0 |
| BXD06 | 0.57 | 6.0 |
| BXD07 | 0.475 | 6.0 |
| BXD08 | 0.403 | 6.0 |
| BXD09 | 0.396 | 6.0 |
| CAST | -0.224 | 5.082 |
| CCcont | 0.794 | 4.123 |
| DS01 | -0.277 | 2.01 |
| DS02 | 0.52 | 2.773 |
| DS04 | 0.33 | 3.114 |
| DS0c | 0.229 | 3.872 |
| GP01 | 0.027 | 5.604 |
| GP02 | 0.47 | 6.0 |
| GP0c | 0.126 | 6.0 |
| NOD | 0.727 | 2.423 |
| NZO | 0.143 | 1.412 |
| PWK | 0.271 | 3.862 |
| H37Rv_KO_CtpC | 0.327 | 5.235 |
| H37Rv_KO_CtpD | 0.091 | 3.389 |
| H37Rv_KO_Rv1272 | 0.16 | 6.0 |
| H37Rv_KO_SugABC | -0.126 | 4.259 |
| H37Rv_KO_MbtN | 0.91 | 6.0 |
| Trans05 | 0.717 | 6.0 |
| macrophage_unactivated | 0.028 | -2.885 |
| IL1 | -0.403 | -3.227 |
| Rapamycin | -0.264 | -3.643 |
| Tcell | -0.121 | -2.691 |
| GMCSF | -0.333 | -3.464 |
| IFNab | 0.163 | 2.905 |
| IFNg | -0.23 | -4.444 |
| IFNg_GMCSF1 | -0.028 | -5.411 |
| Rv1432_day32 | -0.242 | 6.0 |
| Rv1565c_day32 | -0.076 | 0.033 |
| secA2_input | 0.166 | -1.417 |
| delta_Rv3594 | -0.431 | 0.159 |
| delta_Rv3717 | -0.25 | 2.69 |
| delta_Rv3811 | -0.44 | 0.544 |
| delta_Rv0954 | 0.428 | -3.826 |
| PonA1 | 0.129 | -3.418 |
| EccD1_KO | -0.431 | -1.98 |
| EspI_KO | -0.665 | -2.085 |
| PE35_KO | -0.382 | -0.56 |
| PPE68_KO | -0.451 | -1.645 |
| glycerol2 | 0.314 | -5.208 |
| lignocerate | 0.324 | -2.53 |
| oleate | -0.133 | -3.933 |
| phosphatidylcholine | -0.057 | -3.148 |
| acetate | 0.098 | -0.667 |
| glucAc | 0.0 | -0.861 |
| Rv0950ko | 0.612 | -4.363 |
| Rv1096ko | 0.902 | 1.84 |
| Rv3684ko | 0.291 | 0.249 |
| delta_otsA_trehalose | -0.398 | -0.454 |