Top 10 genes with highest correlation to Rv3891c/esxD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3600c/- | (cc=0.511) | info on Rv3600c/- |
| Rv3524/- | (cc=0.4777) | info on Rv3524/- |
| Rv0113/gmhA | (cc=0.456) | info on Rv0113/gmhA |
| Rv3045/adhC | (cc=0.449) | info on Rv3045/adhC |
| Rv2299c/htpG | (cc=0.4252) | info on Rv2299c/htpG |
| Rv0073/- | (cc=0.4248) | info on Rv0073/- |
| Rv3812/PE_PGRS62 | (cc=0.4102) | info on Rv3812/PE_PGRS62 |
| Rv3633/- | (cc=0.4093) | info on Rv3633/- |
| Rv0186A/mymT | (cc=0.4093) | info on Rv0186A/mymT |
| Rv3913/trxB2 | (cc=0.4089) | info on Rv3913/trxB2 |
Correlation of Rv3891c/esxD with Rv3600c/-
Normalized LFCs for Rv3891c/esxD:
(description and provenance of datasets)
| Rv3891c/esxD | Rv3600c/- | |
| Fe_supp_jason_reseq | 1.152 | 1.077 |
| low_pH_jason_reseq | 0.217 | 1.623 |
| NO_jason_reseq | 0.045 | 0.782 |
| B6_jason_reseq | 1.296 | 1.175 |
| MHCII_jason_reseq | 0.694 | 1.194 |
| Isoniazid02 | -0.247 | -2.734 |
| Rifampicin4 | -1.841 | -1.189 |
| Ethambutol3 | -0.371 | 0.083 |
| Meropenem3 | -0.66 | -1.592 |
| Vancomycin16 | -0.684 | 0.52 |
| Rv2680_day32 | 1.323 | 1.45 |
| H37Rv_KO_MarP | 0.171 | 0.794 |
| hypoxia_3wks | -1.101 | -4.135 |
| hypoxia_6wks | -1.163 | -3.773 |
| glycerol | -0.152 | 1.198 |
| cholesterol | -0.367 | 0.85 |
| AJ | -0.155 | 0.165 |
| Bibs02 | 0.589 | 0.595 |
| Bibs02c | 1.566 | 0.503 |
| BL6 | 0.078 | 0.361 |
| BL6a | 0.903 | 0.661 |
| BXD01 | 0.333 | 0.48 |
| BXD010 | 0.294 | 0.046 |
| BXD011 | 0.01 | 0.256 |
| BXD03 | -0.011 | -0.423 |
| BXD04 | 1.005 | 0.158 |
| BXD05 | -0.09 | 0.672 |
| BXD06 | 0.19 | 0.281 |
| BXD07 | -0.115 | 0.13 |
| BXD08 | -0.021 | 0.433 |
| BXD09 | 0.341 | 0.543 |
| CAST | -0.359 | -0.609 |
| CCcont | 0.592 | 1.026 |
| DS01 | 1.482 | 1.215 |
| DS02 | 1.068 | 0.876 |
| DS04 | 0.982 | 0.732 |
| DS0c | 1.732 | 1.163 |
| GP01 | -1.384 | 0.572 |
| GP02 | -0.687 | 0.059 |
| GP0c | -0.265 | -0.1 |
| NOD | -0.018 | -0.142 |
| NZO | -0.348 | -0.318 |
| PWK | -0.517 | 0.0 |
| H37Rv_KO_CtpC | -1.399 | -1.412 |
| H37Rv_KO_CtpD | 1.54 | 1.936 |
| H37Rv_KO_Rv1272 | 1.055 | 0.225 |
| H37Rv_KO_SugABC | 0.737 | -1.267 |
| H37Rv_KO_MbtN | -0.086 | -0.194 |
| Trans05 | 1.239 | -0.476 |
| macrophage_unactivated | 0.467 | 1.054 |
| IL1 | 0.362 | -0.819 |
| Rapamycin | -0.224 | 0.0 |
| Tcell | 1.14 | -0.658 |
| GMCSF | -0.832 | -0.533 |
| IFNab | -0.952 | -0.193 |
| IFNg | -0.569 | -1.165 |
| IFNg_GMCSF1 | -0.229 | -0.635 |
| Rv1432_day32 | 0.104 | 1.008 |
| Rv1565c_day32 | -0.092 | 1.399 |
| secA2_input | -0.393 | -0.064 |
| delta_Rv3594 | -0.482 | -0.101 |
| delta_Rv3717 | -0.101 | -0.055 |
| delta_Rv3811 | -0.486 | -0.628 |
| delta_Rv0954 | 0.11 | -1.765 |
| PonA1 | 1.154 | 1.348 |
| EccD1_KO | -0.585 | 0.171 |
| EspI_KO | -0.65 | 0.59 |
| PE35_KO | -0.691 | 0.735 |
| PPE68_KO | -0.65 | 0.627 |
| glycerol2 | 0.401 | -0.385 |
| lignocerate | 0.237 | 0.178 |
| oleate | -0.791 | -1.0 |
| phosphatidylcholine | 0.011 | 0.08 |
| acetate | -0.271 | 0.617 |
| glucAc | 0.36 | 0.598 |
| Rv0950ko | 1.399 | 1.034 |
| Rv1096ko | 1.2 | 0.546 |
| Rv3684ko | 0.252 | 0.927 |
| delta_otsA_trehalose | 0.064 | -0.459 |