Top 10 genes with highest correlation to Rv3890c/esxC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0057/- | (cc=0.4927) | info on Rv0057/- |
| Rv3305c/amiA1 | (cc=0.4199) | info on Rv3305c/amiA1 |
| Rv0860/fadB | (cc=0.4093) | info on Rv0860/fadB |
| Rv3351c/- | (cc=0.4) | info on Rv3351c/- |
| Rv0142/- | (cc=0.3989) | info on Rv0142/- |
| Rv1876/bfrA | (cc=0.3967) | info on Rv1876/bfrA |
| Rv0727c/fucA | (cc=0.3913) | info on Rv0727c/fucA |
| Rv2963/- | (cc=0.387) | info on Rv2963/- |
| Rv1489/- | (cc=0.3821) | info on Rv1489/- |
| Rv3022A/PE29 | (cc=0.3815) | info on Rv3022A/PE29 |
Correlation of Rv3890c/esxC with Rv0057/-
Normalized LFCs for Rv3890c/esxC:
(description and provenance of datasets)
| Rv3890c/esxC | Rv0057/- | |
| Fe_supp_jason_reseq | 0.167 | -0.033 |
| low_pH_jason_reseq | -1.772 | -1.032 |
| NO_jason_reseq | -1.431 | -1.297 |
| B6_jason_reseq | -0.962 | -0.873 |
| MHCII_jason_reseq | -0.082 | -0.572 |
| Isoniazid02 | -0.557 | -0.263 |
| Rifampicin4 | 0.547 | -1.819 |
| Ethambutol3 | 0.201 | -0.764 |
| Meropenem3 | 0.307 | -0.335 |
| Vancomycin16 | 0.019 | -0.565 |
| Rv2680_day32 | 1.065 | 0.371 |
| H37Rv_KO_MarP | 0.934 | 0.301 |
| hypoxia_3wks | -0.315 | -1.559 |
| hypoxia_6wks | 0.013 | -0.685 |
| glycerol | 0.872 | 0.341 |
| cholesterol | 0.548 | 0.789 |
| AJ | 0.259 | 0.792 |
| Bibs02 | 1.152 | 0.281 |
| Bibs02c | 1.667 | 1.699 |
| BL6 | -0.092 | -0.198 |
| BL6a | 0.946 | 1.507 |
| BXD01 | 0.628 | -0.416 |
| BXD010 | -0.126 | -0.258 |
| BXD011 | 0.447 | -0.376 |
| BXD03 | -0.294 | 0.514 |
| BXD04 | 0.882 | 0.19 |
| BXD05 | 0.224 | -0.646 |
| BXD06 | 0.205 | 0.42 |
| BXD07 | -0.549 | -0.19 |
| BXD08 | 1.135 | 0.024 |
| BXD09 | -0.056 | 0.237 |
| CAST | 0.846 | 0.529 |
| CCcont | 0.997 | 0.548 |
| DS01 | 0.919 | 1.235 |
| DS02 | 0.859 | 0.466 |
| DS04 | 1.873 | 0.17 |
| DS0c | 0.515 | 0.262 |
| GP01 | 0.265 | 0.255 |
| GP02 | -1.355 | -0.789 |
| GP0c | 0.404 | -0.966 |
| NOD | 0.849 | 1.709 |
| NZO | 0.223 | 0.627 |
| PWK | 1.398 | 1.722 |
| H37Rv_KO_CtpC | 0.65 | 0.059 |
| H37Rv_KO_CtpD | 0.185 | -0.121 |
| H37Rv_KO_Rv1272 | 0.877 | 0.799 |
| H37Rv_KO_SugABC | -0.039 | 0.12 |
| H37Rv_KO_MbtN | 0.338 | -0.058 |
| Trans05 | 0.344 | -0.049 |
| macrophage_unactivated | 1.739 | 0.404 |
| IL1 | -0.997 | -0.78 |
| Rapamycin | -0.319 | -0.807 |
| Tcell | 1.398 | 0.0 |
| GMCSF | 0.359 | 0.338 |
| IFNab | -0.088 | -0.248 |
| IFNg | -0.235 | 0.775 |
| IFNg_GMCSF1 | -0.229 | -0.17 |
| Rv1432_day32 | -0.098 | -0.485 |
| Rv1565c_day32 | 0.232 | -1.112 |
| secA2_input | -0.052 | -0.485 |
| delta_Rv3594 | 0.887 | 0.424 |
| delta_Rv3717 | 0.302 | 0.871 |
| delta_Rv3811 | 0.831 | 0.668 |
| delta_Rv0954 | 0.59 | 0.826 |
| PonA1 | -0.187 | 0.152 |
| EccD1_KO | -0.362 | -1.503 |
| EspI_KO | 0.137 | -0.841 |
| PE35_KO | -0.265 | -1.552 |
| PPE68_KO | -0.189 | -1.542 |
| glycerol2 | 0.149 | 0.105 |
| lignocerate | -0.429 | 0.15 |
| oleate | -0.067 | -1.021 |
| phosphatidylcholine | -0.482 | -0.398 |
| acetate | -1.222 | 0.884 |
| glucAc | 1.552 | 0.923 |
| Rv0950ko | -0.211 | 0.498 |
| Rv1096ko | -0.404 | 0.781 |
| Rv3684ko | -0.783 | 0.0 |
| delta_otsA_trehalose | -2.082 | -0.16 |