Top 10 genes with highest correlation to Rv3837c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1683/- | (cc=0.5769) | info on Rv1683/- |
| Rv3842c/glpQ1 | (cc=0.5717) | info on Rv3842c/glpQ1 |
| Rv0502/- | (cc=0.5684) | info on Rv0502/- |
| Rv2185c/TB16.3 | (cc=0.5672) | info on Rv2185c/TB16.3 |
| Rv0930/pstA1 | (cc=0.5614) | info on Rv0930/pstA1 |
| Rv3821/- | (cc=0.5531) | info on Rv3821/- |
| Rv1925/fadD31 | (cc=0.553) | info on Rv1925/fadD31 |
| Rv0425c/ctpH | (cc=0.5502) | info on Rv0425c/ctpH |
| Rv0928/pstS3 | (cc=0.5502) | info on Rv0928/pstS3 |
| Rv0644c/mmaA2 | (cc=0.5466) | info on Rv0644c/mmaA2 |
Correlation of Rv3837c/- with Rv2185c/TB16.3
Normalized LFCs for Rv3837c/-:
(description and provenance of datasets)
| Rv3837c/- | Rv2185c/TB16.3 | |
| Fe_supp_jason_reseq | -1.359 | -0.701 |
| low_pH_jason_reseq | -0.808 | 0.07 |
| NO_jason_reseq | 0.186 | 3.145 |
| B6_jason_reseq | 0.079 | 0.585 |
| MHCII_jason_reseq | 0.267 | 0.741 |
| Isoniazid02 | -1.291 | 0.0 |
| Rifampicin4 | 0.257 | -0.477 |
| Ethambutol3 | 0.063 | 0.112 |
| Meropenem3 | -0.55 | 0.972 |
| Vancomycin16 | 0.22 | -0.395 |
| Rv2680_day32 | 1.501 | 0.824 |
| H37Rv_KO_MarP | 0.73 | 0.789 |
| hypoxia_3wks | -0.79 | 2.719 |
| hypoxia_6wks | -0.497 | 2.103 |
| glycerol | 0.61 | 0.767 |
| cholesterol | 0.683 | -0.064 |
| AJ | -0.077 | 1.114 |
| Bibs02 | 0.452 | 0.04 |
| Bibs02c | 0.208 | 0.045 |
| BL6 | 1.461 | 2.768 |
| BL6a | 0.403 | 2.642 |
| BXD01 | 1.452 | 3.504 |
| BXD010 | 1.033 | 1.842 |
| BXD011 | 1.281 | 2.894 |
| BXD03 | 0.907 | 2.304 |
| BXD04 | 0.916 | 2.256 |
| BXD05 | 0.807 | 2.403 |
| BXD06 | 1.259 | 2.823 |
| BXD07 | 0.629 | 3.21 |
| BXD08 | 1.014 | 2.579 |
| BXD09 | 0.898 | 3.357 |
| CAST | 0.647 | -0.439 |
| CCcont | 0.619 | 1.992 |
| DS01 | 0.198 | 0.631 |
| DS02 | -0.024 | 0.047 |
| DS04 | 0.031 | 0.676 |
| DS0c | -0.519 | 1.215 |
| GP01 | -0.196 | 0.883 |
| GP02 | -0.127 | 1.052 |
| GP0c | 0.752 | 1.959 |
| NOD | -0.233 | -0.88 |
| NZO | 0.247 | -0.134 |
| PWK | 0.82 | 0.163 |
| H37Rv_KO_CtpC | -0.861 | -0.856 |
| H37Rv_KO_CtpD | 1.037 | 0.818 |
| H37Rv_KO_Rv1272 | 1.052 | 2.161 |
| H37Rv_KO_SugABC | 0.783 | -0.357 |
| H37Rv_KO_MbtN | 1.328 | 1.098 |
| Trans05 | 1.742 | 1.263 |
| macrophage_unactivated | 0.088 | 0.761 |
| IL1 | -0.771 | -0.86 |
| Rapamycin | -0.988 | -0.206 |
| Tcell | 0.635 | 1.3 |
| GMCSF | -0.686 | -0.626 |
| IFNab | -0.302 | 0.671 |
| IFNg | -0.551 | -0.567 |
| IFNg_GMCSF1 | 0.584 | 0.135 |
| Rv1432_day32 | 1.567 | 2.759 |
| Rv1565c_day32 | 0.275 | -0.335 |
| secA2_input | 0.65 | 0.092 |
| delta_Rv3594 | 0.613 | 0.884 |
| delta_Rv3717 | 1.258 | 1.24 |
| delta_Rv3811 | -0.228 | 0.741 |
| delta_Rv0954 | -0.637 | -0.658 |
| PonA1 | -0.234 | -1.11 |
| EccD1_KO | -0.5 | -2.273 |
| EspI_KO | -0.462 | -1.526 |
| PE35_KO | -1.52 | -0.309 |
| PPE68_KO | -0.992 | -0.8 |
| glycerol2 | 0.933 | 2.172 |
| lignocerate | -0.05 | 0.082 |
| oleate | 1.085 | -0.373 |
| phosphatidylcholine | 0.315 | 0.183 |
| acetate | 0.479 | 1.485 |
| glucAc | -0.702 | 1.409 |
| Rv0950ko | -0.341 | -1.423 |
| Rv1096ko | -0.157 | -0.814 |
| Rv3684ko | -0.77 | -1.019 |
| delta_otsA_trehalose | -0.372 | -0.363 |