Top 10 genes with highest correlation to Rv3823c/mmpL8:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3821/- | (cc=0.8017) | info on Rv3821/- |
| Rv0929/pstC2 | (cc=0.6506) | info on Rv0929/pstC2 |
| Rv0181c/- | (cc=0.6403) | info on Rv0181c/- |
| Rv3146/nuoB | (cc=0.6338) | info on Rv3146/nuoB |
| Rv0473/- | (cc=0.6305) | info on Rv0473/- |
| Rv2374c/hrcA | (cc=0.6242) | info on Rv2374c/hrcA |
| Rv3210c/- | (cc=0.6237) | info on Rv3210c/- |
| Rv0928/pstS3 | (cc=0.622) | info on Rv0928/pstS3 |
| Rv3150/nuoF | (cc=0.62) | info on Rv3150/nuoF |
| Rv3232c/ppk2 | (cc=0.6182) | info on Rv3232c/ppk2 |
Correlation of Rv3823c/mmpL8 with Rv3232c/ppk2
Normalized LFCs for Rv3823c/mmpL8:
(description and provenance of datasets)
| Rv3823c/mmpL8 | Rv3232c/ppk2 | |
| Fe_supp_jason_reseq | 0.636 | -0.068 |
| low_pH_jason_reseq | 1.265 | -1.066 |
| NO_jason_reseq | 0.929 | -1.047 |
| B6_jason_reseq | -2.255 | -1.198 |
| MHCII_jason_reseq | -1.75 | -1.093 |
| Isoniazid02 | -1.395 | 0.221 |
| Rifampicin4 | -0.485 | -0.233 |
| Ethambutol3 | -0.781 | 0.328 |
| Meropenem3 | -0.795 | -0.364 |
| Vancomycin16 | -0.825 | -0.342 |
| Rv2680_day32 | 2.354 | 0.064 |
| H37Rv_KO_MarP | -0.038 | -0.037 |
| hypoxia_3wks | -2.751 | -1.435 |
| hypoxia_6wks | -1.967 | -1.128 |
| glycerol | -0.607 | -0.607 |
| cholesterol | -0.492 | -0.317 |
| AJ | -1.819 | 0.56 |
| Bibs02 | -0.55 | 0.009 |
| Bibs02c | -0.062 | 0.593 |
| BL6 | 1.483 | 0.924 |
| BL6a | 1.679 | 1.425 |
| BXD01 | 2.137 | 1.132 |
| BXD010 | 1.589 | 0.856 |
| BXD011 | 2.276 | 0.862 |
| BXD03 | 1.512 | 1.061 |
| BXD04 | 2.143 | 0.856 |
| BXD05 | 1.969 | 1.516 |
| BXD06 | 1.823 | 1.003 |
| BXD07 | 2.074 | 0.976 |
| BXD08 | 1.161 | 1.19 |
| BXD09 | 2.705 | 1.098 |
| CAST | -1.805 | 0.067 |
| CCcont | 1.968 | 0.915 |
| DS01 | -1.105 | 0.407 |
| DS02 | -0.922 | 0.31 |
| DS04 | -0.822 | -0.436 |
| DS0c | 0.402 | 0.976 |
| GP01 | 1.7 | -0.087 |
| GP02 | 2.128 | 0.119 |
| GP0c | 1.659 | -0.007 |
| NOD | -1.627 | -0.244 |
| NZO | -1.332 | 0.377 |
| PWK | -1.795 | -0.068 |
| H37Rv_KO_CtpC | 1.153 | 1.53 |
| H37Rv_KO_CtpD | 1.184 | 1.154 |
| H37Rv_KO_Rv1272 | 1.787 | 0.961 |
| H37Rv_KO_SugABC | 0.787 | 1.017 |
| H37Rv_KO_MbtN | 2.801 | 1.109 |
| Trans05 | 2.087 | 1.166 |
| macrophage_unactivated | -0.489 | 0.489 |
| IL1 | -0.709 | -0.35 |
| Rapamycin | -0.172 | -0.35 |
| Tcell | -2.167 | -0.248 |
| GMCSF | -1.22 | -0.063 |
| IFNab | 0.877 | 0.284 |
| IFNg | -2.061 | -0.465 |
| IFNg_GMCSF1 | -1.612 | 0.119 |
| Rv1432_day32 | 3.75 | 0.961 |
| Rv1565c_day32 | -1.339 | 0.126 |
| secA2_input | -0.207 | 0.111 |
| delta_Rv3594 | 0.072 | 0.234 |
| delta_Rv3717 | 1.039 | -0.279 |
| delta_Rv3811 | 0.341 | 0.086 |
| delta_Rv0954 | -0.709 | 0.044 |
| PonA1 | -0.851 | -0.224 |
| EccD1_KO | 0.329 | 0.293 |
| EspI_KO | 0.054 | 0.605 |
| PE35_KO | -0.98 | 0.443 |
| PPE68_KO | -0.406 | 0.272 |
| glycerol2 | 0.657 | 0.807 |
| lignocerate | -0.293 | 0.594 |
| oleate | 1.418 | 0.44 |
| phosphatidylcholine | -0.161 | 0.44 |
| acetate | -0.191 | -0.301 |
| glucAc | 0.0 | 0.131 |
| Rv0950ko | -0.504 | 0.235 |
| Rv1096ko | 0.075 | -0.069 |
| Rv3684ko | 2.397 | 0.246 |
| delta_otsA_trehalose | -0.64 | 0.616 |