Top 10 genes with highest correlation to Rv3823c/mmpL8:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3821/- | (cc=0.8017) | info on Rv3821/- |
| Rv0929/pstC2 | (cc=0.6506) | info on Rv0929/pstC2 |
| Rv0181c/- | (cc=0.6403) | info on Rv0181c/- |
| Rv3146/nuoB | (cc=0.6338) | info on Rv3146/nuoB |
| Rv0473/- | (cc=0.6305) | info on Rv0473/- |
| Rv2374c/hrcA | (cc=0.6242) | info on Rv2374c/hrcA |
| Rv3210c/- | (cc=0.6237) | info on Rv3210c/- |
| Rv0928/pstS3 | (cc=0.622) | info on Rv0928/pstS3 |
| Rv3150/nuoF | (cc=0.62) | info on Rv3150/nuoF |
| Rv3232c/ppk2 | (cc=0.6182) | info on Rv3232c/ppk2 |
Correlation of Rv3823c/mmpL8 with Rv3821/-
Normalized LFCs for Rv3823c/mmpL8:
(description and provenance of datasets)
| Rv3823c/mmpL8 | Rv3821/- | |
| Fe_supp_jason_reseq | 0.636 | 0.204 |
| low_pH_jason_reseq | 1.265 | 0.361 |
| NO_jason_reseq | 0.929 | 1.334 |
| B6_jason_reseq | -2.255 | -1.143 |
| MHCII_jason_reseq | -1.75 | -0.348 |
| Isoniazid02 | -1.395 | 0.016 |
| Rifampicin4 | -0.485 | 0.563 |
| Ethambutol3 | -0.781 | -0.344 |
| Meropenem3 | -0.795 | 1.73 |
| Vancomycin16 | -0.825 | 0.653 |
| Rv2680_day32 | 2.354 | 3.832 |
| H37Rv_KO_MarP | -0.038 | -0.571 |
| hypoxia_3wks | -2.751 | -0.514 |
| hypoxia_6wks | -1.967 | 0.908 |
| glycerol | -0.607 | -0.23 |
| cholesterol | -0.492 | 0.042 |
| AJ | -1.819 | -0.447 |
| Bibs02 | -0.55 | 0.514 |
| Bibs02c | -0.062 | 1.05 |
| BL6 | 1.483 | 2.286 |
| BL6a | 1.679 | 2.042 |
| BXD01 | 2.137 | 2.706 |
| BXD010 | 1.589 | 2.187 |
| BXD011 | 2.276 | 2.819 |
| BXD03 | 1.512 | 1.409 |
| BXD04 | 2.143 | 1.611 |
| BXD05 | 1.969 | 2.385 |
| BXD06 | 1.823 | 2.108 |
| BXD07 | 2.074 | 2.655 |
| BXD08 | 1.161 | 1.878 |
| BXD09 | 2.705 | 3.365 |
| CAST | -1.805 | -1.88 |
| CCcont | 1.968 | 1.367 |
| DS01 | -1.105 | 1.008 |
| DS02 | -0.922 | 0.871 |
| DS04 | -0.822 | 0.573 |
| DS0c | 0.402 | 1.116 |
| GP01 | 1.7 | 0.892 |
| GP02 | 2.128 | 0.016 |
| GP0c | 1.659 | 1.028 |
| NOD | -1.627 | -0.067 |
| NZO | -1.332 | 0.256 |
| PWK | -1.795 | -0.622 |
| H37Rv_KO_CtpC | 1.153 | 0.766 |
| H37Rv_KO_CtpD | 1.184 | 1.965 |
| H37Rv_KO_Rv1272 | 1.787 | 2.215 |
| H37Rv_KO_SugABC | 0.787 | 1.93 |
| H37Rv_KO_MbtN | 2.801 | 2.409 |
| Trans05 | 2.087 | 2.097 |
| macrophage_unactivated | -0.489 | -0.925 |
| IL1 | -0.709 | -2.684 |
| Rapamycin | -0.172 | -1.264 |
| Tcell | -2.167 | -2.434 |
| GMCSF | -1.22 | -1.434 |
| IFNab | 0.877 | 0.958 |
| IFNg | -2.061 | -1.922 |
| IFNg_GMCSF1 | -1.612 | -1.596 |
| Rv1432_day32 | 3.75 | 6.0 |
| Rv1565c_day32 | -1.339 | -1.827 |
| secA2_input | -0.207 | -0.864 |
| delta_Rv3594 | 0.072 | 0.739 |
| delta_Rv3717 | 1.039 | 2.095 |
| delta_Rv3811 | 0.341 | 1.447 |
| delta_Rv0954 | -0.709 | 0.062 |
| PonA1 | -0.851 | -0.208 |
| EccD1_KO | 0.329 | -0.816 |
| EspI_KO | 0.054 | -0.374 |
| PE35_KO | -0.98 | -0.799 |
| PPE68_KO | -0.406 | -0.761 |
| glycerol2 | 0.657 | 2.208 |
| lignocerate | -0.293 | 0.826 |
| oleate | 1.418 | 2.711 |
| phosphatidylcholine | -0.161 | 0.458 |
| acetate | -0.191 | 0.168 |
| glucAc | 0.0 | 0.249 |
| Rv0950ko | -0.504 | 0.467 |
| Rv1096ko | 0.075 | 0.404 |
| Rv3684ko | 2.397 | 2.826 |
| delta_otsA_trehalose | -0.64 | -0.335 |