Top 10 genes with highest correlation to Rv3810/pirG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1860/apa | (cc=0.6837) | info on Rv1860/apa |
| Rv2363/amiA2 | (cc=0.6461) | info on Rv2363/amiA2 |
| Rv1006/- | (cc=0.629) | info on Rv1006/- |
| Rv0999/- | (cc=0.6163) | info on Rv0999/- |
| Rv1821/secA2 | (cc=0.6126) | info on Rv1821/secA2 |
| Rv3005c/- | (cc=0.587) | info on Rv3005c/- |
| Rv0007/- | (cc=0.5824) | info on Rv0007/- |
| Rv2700/- | (cc=0.5773) | info on Rv2700/- |
| Rv0436c/pssA | (cc=0.5632) | info on Rv0436c/pssA |
| Rv3269/- | (cc=0.5566) | info on Rv3269/- |
Correlation of Rv3810/pirG with Rv1860/apa
Normalized LFCs for Rv3810/pirG:
(description and provenance of datasets)
| Rv3810/pirG | Rv1860/apa | |
| Fe_supp_jason_reseq | 0.253 | 3.272 |
| low_pH_jason_reseq | -0.842 | -0.457 |
| NO_jason_reseq | -1.32 | 0.129 |
| B6_jason_reseq | -0.85 | 0.054 |
| MHCII_jason_reseq | -0.614 | -0.101 |
| Isoniazid02 | 0.469 | -1.043 |
| Rifampicin4 | -4.703 | -5.772 |
| Ethambutol3 | -1.131 | 0.061 |
| Meropenem3 | -0.386 | -0.701 |
| Vancomycin16 | -4.019 | -5.858 |
| Rv2680_day32 | -0.947 | 1.123 |
| H37Rv_KO_MarP | -0.734 | -3.981 |
| hypoxia_3wks | -4.175 | -1.958 |
| hypoxia_6wks | -2.859 | -3.197 |
| glycerol | 1.147 | 1.934 |
| cholesterol | 1.797 | 1.239 |
| AJ | -0.983 | -0.541 |
| Bibs02 | 0.976 | 0.898 |
| Bibs02c | 0.805 | 0.838 |
| BL6 | -0.768 | -0.822 |
| BL6a | -1.019 | -0.55 |
| BXD01 | -0.67 | -1.087 |
| BXD010 | -0.787 | -1.021 |
| BXD011 | -0.782 | -0.643 |
| BXD03 | -0.573 | -0.934 |
| BXD04 | -0.236 | -1.131 |
| BXD05 | -0.827 | -0.123 |
| BXD06 | -0.687 | -1.014 |
| BXD07 | -0.851 | -1.156 |
| BXD08 | -0.817 | -0.564 |
| BXD09 | -0.863 | -0.75 |
| CAST | -0.782 | -1.59 |
| CCcont | 1.43 | 1.056 |
| DS01 | 0.133 | 0.801 |
| DS02 | 0.922 | 0.737 |
| DS04 | 1.405 | 1.248 |
| DS0c | 0.239 | -0.652 |
| GP01 | 1.26 | -0.682 |
| GP02 | -0.353 | -1.0 |
| GP0c | 0.446 | -1.085 |
| NOD | -0.763 | -1.01 |
| NZO | -1.225 | 0.626 |
| PWK | -1.205 | -0.544 |
| H37Rv_KO_CtpC | 0.341 | 1.966 |
| H37Rv_KO_CtpD | 0.072 | -0.751 |
| H37Rv_KO_Rv1272 | -0.598 | 0.141 |
| H37Rv_KO_SugABC | 1.297 | 1.422 |
| H37Rv_KO_MbtN | -0.271 | 0.349 |
| Trans05 | -0.161 | 1.414 |
| macrophage_unactivated | 0.0 | 0.609 |
| IL1 | -0.374 | -0.78 |
| Rapamycin | -0.387 | -0.328 |
| Tcell | -0.411 | -0.857 |
| GMCSF | -0.694 | 0.09 |
| IFNab | 0.0 | -0.553 |
| IFNg | -0.337 | -0.286 |
| IFNg_GMCSF1 | 0.0 | -0.22 |
| Rv1432_day32 | 0.314 | 1.0 |
| Rv1565c_day32 | -0.325 | 0.351 |
| secA2_input | -1.154 | 1.19 |
| delta_Rv3594 | 2.674 | 1.386 |
| delta_Rv3717 | 1.805 | 0.839 |
| delta_Rv3811 | 2.589 | 1.423 |
| delta_Rv0954 | -0.057 | 2.022 |
| PonA1 | -0.269 | 0.397 |
| EccD1_KO | -1.365 | 0.918 |
| EspI_KO | -0.046 | 1.189 |
| PE35_KO | 1.356 | 1.021 |
| PPE68_KO | -0.31 | 1.315 |
| glycerol2 | -1.063 | -0.563 |
| lignocerate | -1.064 | -0.521 |
| oleate | -1.613 | -0.173 |
| phosphatidylcholine | -1.594 | -1.097 |
| acetate | -0.763 | 0.648 |
| glucAc | -0.3 | 0.153 |
| Rv0950ko | -2.406 | -1.049 |
| Rv1096ko | -0.036 | -0.98 |
| Rv3684ko | 0.416 | 0.138 |
| delta_otsA_trehalose | -2.168 | -0.86 |