TnSeqCorr

Top 10 genes with highest correlation to Rv3756c/proZ:

update plotcorrelationlink to info on gene
Rv0312/- (cc=0.4932) info on Rv0312/-
Rv0593/lprL (cc=0.4725) info on Rv0593/lprL
Rv0664/vapB8 (cc=0.4642) info on Rv0664/vapB8
Rv1057/- (cc=0.4612) info on Rv1057/-
Rv2577/- (cc=0.4565) info on Rv2577/-
Rv0870c/- (cc=0.4308) info on Rv0870c/-
Rv3395c/- (cc=0.427) info on Rv3395c/-
Rv0263c/- (cc=0.4169) info on Rv0263c/-
Rv2009/vapB15 (cc=0.4037) info on Rv2009/vapB15
Rv3763/lpqH (cc=0.401) info on Rv3763/lpqH

Correlation of Rv3756c/proZ with Rv0263c/-

Normalized LFCs for Rv3756c/proZ:
(description and provenance of datasets)
Rv3756c/proZRv0263c/-
Fe_supp_jason_reseq

0.275

-0.208

low_pH_jason_reseq

-0.171

0.286

NO_jason_reseq

-0.373

-0.47

B6_jason_reseq

0.067

-0.271

MHCII_jason_reseq

0.331

0.492

Isoniazid02

-1.173

0.499

Rifampicin4

-0.387

-0.563

Ethambutol3

0.426

1.763

Meropenem3

-1.049

-0.341

Vancomycin16

-0.783

0.167

Rv2680_day32

-2.021

-0.698

H37Rv_KO_MarP

0.045

0.309

hypoxia_3wks

-0.339

0.064

hypoxia_6wks

-0.672

-0.24

glycerol

0.851

0.753

cholesterol

0.355

3.247

AJ

-0.587

0.466

Bibs02

0.024

-0.189

Bibs02c

-0.182

-0.333

BL6

-0.479

-1.34

BL6a

-0.686

-0.828

BXD01

-0.44

-1.666

BXD010

-0.185

-1.779

BXD011

-0.677

-0.72

BXD03

0.092

-1.621

BXD04

-0.178

-1.556

BXD05

0.472

-0.345

BXD06

-0.6

-1.017

BXD07

-0.678

-1.66

BXD08

0.284

-1.083

BXD09

-0.462

-1.346

CAST

0.199

0.028

CCcont

-0.531

-2.109

DS01

-0.092

-0.532

DS02

-0.057

-0.123

DS04

-0.93

-0.707

DS0c

0.16

0.435

GP01

0.067

-1.661

GP02

1.492

0.919

GP0c

0.382

-1.837

NOD

-1.342

0.055

NZO

-1.484

-0.624

PWK

0.158

-0.325

H37Rv_KO_CtpC

-1.146

-0.329

H37Rv_KO_CtpD

-1.217

-1.883

H37Rv_KO_Rv1272

-0.811

-0.842

H37Rv_KO_SugABC

-1.183

-2.117

H37Rv_KO_MbtN

-1.897

-1.385

Trans05

-0.396

-1.173

macrophage_unactivated

-1.875

-1.632

IL1

-0.922

-0.753

Rapamycin

-0.405

-0.451

Tcell

-1.049

-1.541

GMCSF

-0.296

-1.735

IFNab

-0.429

-1.366

IFNg

-0.433

-1.152

IFNg_GMCSF1

-0.77

-0.974

Rv1432_day32

0.602

0.0

Rv1565c_day32

-0.403

-0.855

secA2_input

-0.33

0.074

delta_Rv3594

-0.041

0.532

delta_Rv3717

0.361

0.764

delta_Rv3811

-0.718

1.438

delta_Rv0954

0.099

0.516

PonA1

0.306

0.843

EccD1_KO

0.826

0.168

EspI_KO

-1.135

0.599

PE35_KO

-0.592

-0.84

PPE68_KO

-0.138

-0.227

glycerol2

0.349

-0.121

lignocerate

0.561

-0.915

oleate

-0.58

-0.7

phosphatidylcholine

0.308

-0.216

acetate

0.963

0.231

glucAc

0.242

-0.259

Rv0950ko

0.247

1.077

Rv1096ko

0.67

1.252

Rv3684ko

0.567

0.472

delta_otsA_trehalose

0.564

-0.378