Top 10 genes with highest correlation to Rv3750c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3232c/ppk2 | (cc=0.6217) | info on Rv3232c/ppk2 |
| Rv1504c/- | (cc=0.6116) | info on Rv1504c/- |
| Rv2430c/PPE41 | (cc=0.5983) | info on Rv2430c/PPE41 |
| Rv2519/PE26 | (cc=0.5945) | info on Rv2519/PE26 |
| Rv3152/nuoH | (cc=0.5911) | info on Rv3152/nuoH |
| Rv2513/- | (cc=0.5823) | info on Rv2513/- |
| Rv1059/- | (cc=0.5777) | info on Rv1059/- |
| Rv2735c/- | (cc=0.5705) | info on Rv2735c/- |
| Rv1500/- | (cc=0.5694) | info on Rv1500/- |
| Rv1664/pks9 | (cc=0.5607) | info on Rv1664/pks9 |
Correlation of Rv3750c/- with Rv2430c/PPE41
Normalized LFCs for Rv3750c/-:
(description and provenance of datasets)
| Rv3750c/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -0.723 | -0.259 |
| low_pH_jason_reseq | -0.052 | -0.617 |
| NO_jason_reseq | -0.163 | -0.326 |
| B6_jason_reseq | -1.315 | -0.565 |
| MHCII_jason_reseq | -1.782 | -1.222 |
| Isoniazid02 | 0.039 | -0.362 |
| Rifampicin4 | -0.758 | -0.379 |
| Ethambutol3 | 0.134 | -0.539 |
| Meropenem3 | -0.492 | 0.604 |
| Vancomycin16 | 0.058 | -0.541 |
| Rv2680_day32 | 0.426 | -0.546 |
| H37Rv_KO_MarP | 0.498 | 0.78 |
| hypoxia_3wks | -1.447 | -0.016 |
| hypoxia_6wks | -0.679 | -0.558 |
| glycerol | 1.233 | -1.482 |
| cholesterol | -0.765 | -0.355 |
| AJ | -0.536 | 1.329 |
| Bibs02 | 0.764 | 0.293 |
| Bibs02c | 1.075 | -0.441 |
| BL6 | 0.798 | 2.014 |
| BL6a | 1.499 | 1.624 |
| BXD01 | 1.087 | 1.73 |
| BXD010 | 1.049 | 2.268 |
| BXD011 | 0.801 | 2.003 |
| BXD03 | 0.729 | 2.085 |
| BXD04 | 0.932 | 2.116 |
| BXD05 | 1.4 | 2.269 |
| BXD06 | 1.206 | 1.836 |
| BXD07 | 1.543 | 1.829 |
| BXD08 | 1.697 | 1.59 |
| BXD09 | 0.75 | 1.891 |
| CAST | 1.148 | 1.024 |
| CCcont | 1.338 | 1.659 |
| DS01 | 0.811 | 1.092 |
| DS02 | 1.257 | 0.558 |
| DS04 | 0.032 | 0.769 |
| DS0c | 1.92 | 0.509 |
| GP01 | 1.878 | 0.134 |
| GP02 | -0.042 | 2.462 |
| GP0c | 0.865 | 0.343 |
| NOD | 0.361 | 1.447 |
| NZO | 0.685 | 0.483 |
| PWK | -0.453 | 0.872 |
| H37Rv_KO_CtpC | 1.655 | 0.914 |
| H37Rv_KO_CtpD | 0.933 | 1.252 |
| H37Rv_KO_Rv1272 | 1.322 | 1.399 |
| H37Rv_KO_SugABC | 0.409 | 1.91 |
| H37Rv_KO_MbtN | 1.622 | 1.129 |
| Trans05 | 1.553 | 2.226 |
| macrophage_unactivated | 0.413 | 1.076 |
| IL1 | -0.682 | 0.125 |
| Rapamycin | 0.095 | 0.19 |
| Tcell | -0.062 | 0.094 |
| GMCSF | 0.224 | 0.636 |
| IFNab | -0.435 | 0.308 |
| IFNg | 0.545 | 0.537 |
| IFNg_GMCSF1 | 0.936 | 0.688 |
| Rv1432_day32 | -0.563 | -0.428 |
| Rv1565c_day32 | 1.265 | 0.782 |
| secA2_input | -0.537 | -0.891 |
| delta_Rv3594 | 0.324 | -0.571 |
| delta_Rv3717 | -0.372 | -1.178 |
| delta_Rv3811 | -0.122 | -0.265 |
| delta_Rv0954 | -0.496 | -1.172 |
| PonA1 | -0.763 | -0.066 |
| EccD1_KO | -0.023 | -0.625 |
| EspI_KO | 0.294 | -0.331 |
| PE35_KO | -1.041 | -0.726 |
| PPE68_KO | -1.126 | -0.701 |
| glycerol2 | -0.261 | -0.084 |
| lignocerate | 0.226 | -0.073 |
| oleate | 0.009 | 0.234 |
| phosphatidylcholine | 0.017 | 0.041 |
| acetate | 0.219 | 0.017 |
| glucAc | 0.466 | -0.627 |
| Rv0950ko | -0.383 | -0.136 |
| Rv1096ko | -1.149 | -0.22 |
| Rv3684ko | -0.874 | -0.508 |
| delta_otsA_trehalose | 2.322 | 1.428 |