Top 10 genes with highest correlation to Rv3704c/gshA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3577/- | (cc=0.5401) | info on Rv3577/- |
| Rv0551c/fadD8 | (cc=0.5394) | info on Rv0551c/fadD8 |
| Rv0317c/glpQ2 | (cc=0.5387) | info on Rv0317c/glpQ2 |
| Rv1761c/- | (cc=0.5288) | info on Rv1761c/- |
| Rv2701c/suhB | (cc=0.5122) | info on Rv2701c/suhB |
| Rv2642/- | (cc=0.5012) | info on Rv2642/- |
| Rv2787/- | (cc=0.5009) | info on Rv2787/- |
| Rv2924c/fpg | (cc=0.4966) | info on Rv2924c/fpg |
| Rv0969/ctpV | (cc=0.4915) | info on Rv0969/ctpV |
| Rv0022c/whiB5 | (cc=0.4766) | info on Rv0022c/whiB5 |
Correlation of Rv3704c/gshA with Rv3577/-
Normalized LFCs for Rv3704c/gshA:
(description and provenance of datasets)
| Rv3704c/gshA | Rv3577/- | |
| Fe_supp_jason_reseq | -0.396 | 0.625 |
| low_pH_jason_reseq | -1.21 | -0.043 |
| NO_jason_reseq | -0.231 | 0.378 |
| B6_jason_reseq | -1.14 | -0.378 |
| MHCII_jason_reseq | -0.376 | 0.163 |
| Isoniazid02 | -0.195 | -0.266 |
| Rifampicin4 | -0.106 | -0.601 |
| Ethambutol3 | 0.344 | -0.32 |
| Meropenem3 | 0.06 | -0.266 |
| Vancomycin16 | 0.05 | -0.589 |
| Rv2680_day32 | 0.159 | -0.793 |
| H37Rv_KO_MarP | 0.689 | 0.595 |
| hypoxia_3wks | -0.478 | 0.235 |
| hypoxia_6wks | -0.058 | 0.464 |
| glycerol | -0.025 | -0.939 |
| cholesterol | 0.953 | -0.674 |
| AJ | -0.793 | -0.156 |
| Bibs02 | -0.711 | 0.0 |
| Bibs02c | -0.62 | 0.932 |
| BL6 | -0.622 | -0.323 |
| BL6a | -0.844 | -0.24 |
| BXD01 | -0.814 | -0.088 |
| BXD010 | -0.84 | -0.064 |
| BXD011 | -1.005 | -1.306 |
| BXD03 | 0.055 | -0.294 |
| BXD04 | -0.512 | 0.187 |
| BXD05 | -1.062 | 0.043 |
| BXD06 | -1.041 | -1.257 |
| BXD07 | -0.825 | -0.357 |
| BXD08 | -0.063 | -1.1 |
| BXD09 | -0.89 | -0.69 |
| CAST | -1.458 | -0.594 |
| CCcont | -0.979 | -0.481 |
| DS01 | -0.524 | 0.551 |
| DS02 | -0.093 | 0.618 |
| DS04 | -0.755 | -0.271 |
| DS0c | -0.393 | 0.896 |
| GP01 | 0.218 | -0.459 |
| GP02 | 0.152 | 0.649 |
| GP0c | 0.073 | 0.448 |
| NOD | 0.936 | 0.373 |
| NZO | 0.42 | -0.316 |
| PWK | -0.215 | 1.053 |
| H37Rv_KO_CtpC | -0.446 | 0.026 |
| H37Rv_KO_CtpD | -0.211 | -0.656 |
| H37Rv_KO_Rv1272 | -0.819 | -1.022 |
| H37Rv_KO_SugABC | -0.373 | -1.574 |
| H37Rv_KO_MbtN | -0.192 | -1.012 |
| Trans05 | -0.952 | -0.158 |
| macrophage_unactivated | -1.332 | -0.126 |
| IL1 | -0.131 | -0.555 |
| Rapamycin | -0.414 | -0.856 |
| Tcell | -0.652 | -1.228 |
| GMCSF | -0.869 | -0.613 |
| IFNab | -0.58 | 0.115 |
| IFNg | -0.601 | -1.008 |
| IFNg_GMCSF1 | 0.154 | -1.103 |
| Rv1432_day32 | -0.568 | 0.0 |
| Rv1565c_day32 | -1.294 | -0.586 |
| secA2_input | 0.326 | 2.537 |
| delta_Rv3594 | -0.604 | 0.555 |
| delta_Rv3717 | -0.21 | 1.159 |
| delta_Rv3811 | -0.373 | 1.017 |
| delta_Rv0954 | 0.827 | 2.482 |
| PonA1 | 0.856 | 0.372 |
| EccD1_KO | -0.062 | 0.089 |
| EspI_KO | -0.165 | 0.0 |
| PE35_KO | -0.274 | 0.726 |
| PPE68_KO | -0.966 | -0.086 |
| glycerol2 | -0.436 | -1.401 |
| lignocerate | -0.488 | -0.838 |
| oleate | 0.584 | -0.387 |
| phosphatidylcholine | -0.388 | -1.021 |
| acetate | -0.961 | -0.663 |
| glucAc | -0.935 | -0.482 |
| Rv0950ko | 0.392 | 0.0 |
| Rv1096ko | 0.884 | 0.971 |
| Rv3684ko | 0.386 | 0.789 |
| delta_otsA_trehalose | 3.177 | 4.326 |