Top 10 genes with highest correlation to Rv3686c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0932c/pstS2 | (cc=0.4817) | info on Rv0932c/pstS2 |
| Rv1399c/nlhH | (cc=0.4813) | info on Rv1399c/nlhH |
| Rv0065/vapC1 | (cc=0.4717) | info on Rv0065/vapC1 |
| Rv0148/- | (cc=0.4705) | info on Rv0148/- |
| Rv0194/- | (cc=0.446) | info on Rv0194/- |
| Rv1488/- | (cc=0.4367) | info on Rv1488/- |
| Rv3108/- | (cc=0.4325) | info on Rv3108/- |
| Rv1947/- | (cc=0.4302) | info on Rv1947/- |
| Rv2947c/pks15 | (cc=0.4174) | info on Rv2947c/pks15 |
| Rv2345/- | (cc=0.4158) | info on Rv2345/- |
Correlation of Rv3686c/- with Rv0065/vapC1
Normalized LFCs for Rv3686c/-:
(description and provenance of datasets)
| Rv3686c/- | Rv0065/vapC1 | |
| Fe_supp_jason_reseq | -0.354 | -0.242 |
| low_pH_jason_reseq | -1.596 | -0.443 |
| NO_jason_reseq | -0.685 | 1.074 |
| B6_jason_reseq | -0.767 | -0.697 |
| MHCII_jason_reseq | -0.201 | -1.223 |
| Isoniazid02 | -1.333 | -3.443 |
| Rifampicin4 | -0.969 | 0.501 |
| Ethambutol3 | -1.155 | -3.103 |
| Meropenem3 | -1.345 | -1.239 |
| Vancomycin16 | -0.541 | -0.992 |
| Rv2680_day32 | 0.434 | -0.056 |
| H37Rv_KO_MarP | 0.167 | -0.449 |
| hypoxia_3wks | 0.0 | -0.207 |
| hypoxia_6wks | -0.209 | -0.626 |
| glycerol | -0.187 | -0.707 |
| cholesterol | 0.243 | 0.338 |
| AJ | -0.597 | 0.491 |
| Bibs02 | -0.17 | 0.033 |
| Bibs02c | 0.255 | -1.234 |
| BL6 | -0.72 | 0.179 |
| BL6a | 0.159 | -0.822 |
| BXD01 | 0.326 | -0.202 |
| BXD010 | -0.059 | -0.882 |
| BXD011 | 0.112 | 0.477 |
| BXD03 | 0.298 | 0.506 |
| BXD04 | 0.592 | -0.496 |
| BXD05 | -0.081 | -0.1 |
| BXD06 | 0.117 | -0.1 |
| BXD07 | -0.227 | -0.187 |
| BXD08 | 0.637 | -0.322 |
| BXD09 | 0.284 | -0.263 |
| CAST | 0.372 | 0.122 |
| CCcont | -0.413 | -1.377 |
| DS01 | -0.465 | -1.11 |
| DS02 | -0.476 | -0.577 |
| DS04 | -0.186 | -1.789 |
| DS0c | 0.044 | -0.429 |
| GP01 | 0.236 | -0.614 |
| GP02 | 0.46 | 0.051 |
| GP0c | -1.034 | -0.808 |
| NOD | -0.081 | 1.032 |
| NZO | 0.432 | 0.564 |
| PWK | 0.379 | -0.054 |
| H37Rv_KO_CtpC | -0.56 | -0.833 |
| H37Rv_KO_CtpD | 0.927 | 0.81 |
| H37Rv_KO_Rv1272 | -0.231 | -0.294 |
| H37Rv_KO_SugABC | 0.96 | 1.95 |
| H37Rv_KO_MbtN | -0.865 | 0.961 |
| Trans05 | 0.728 | 1.174 |
| macrophage_unactivated | 0.019 | 0.937 |
| IL1 | -0.03 | -0.774 |
| Rapamycin | 0.436 | -0.678 |
| Tcell | -0.13 | -1.124 |
| GMCSF | -0.351 | -0.797 |
| IFNab | 0.447 | 0.033 |
| IFNg | 0.283 | 0.235 |
| IFNg_GMCSF1 | 0.537 | 0.242 |
| Rv1432_day32 | 0.704 | 1.063 |
| Rv1565c_day32 | -1.627 | -1.121 |
| secA2_input | 0.985 | 1.008 |
| delta_Rv3594 | -0.18 | -0.607 |
| delta_Rv3717 | 0.651 | -0.44 |
| delta_Rv3811 | 0.443 | -0.229 |
| delta_Rv0954 | -0.903 | -0.308 |
| PonA1 | -0.268 | 0.75 |
| EccD1_KO | 0.145 | -0.309 |
| EspI_KO | 0.02 | -0.177 |
| PE35_KO | 0.222 | -0.228 |
| PPE68_KO | -0.259 | -0.624 |
| glycerol2 | -0.179 | -0.464 |
| lignocerate | -0.356 | -0.999 |
| oleate | 0.068 | -0.262 |
| phosphatidylcholine | -0.367 | -0.796 |
| acetate | -0.893 | -0.55 |
| glucAc | -0.64 | -0.641 |
| Rv0950ko | -0.648 | 0.289 |
| Rv1096ko | -0.51 | -0.103 |
| Rv3684ko | 0.203 | -0.894 |
| delta_otsA_trehalose | -0.684 | -0.958 |