Top 10 genes with highest correlation to Rv3665c/dppB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3776/- | (cc=0.4675) | info on Rv3776/- |
| Rv1944c/- | (cc=0.4409) | info on Rv1944c/- |
| Rv3813c/- | (cc=0.4353) | info on Rv3813c/- |
| Rv2665/- | (cc=0.4068) | info on Rv2665/- |
| Rv2804c/- | (cc=0.4004) | info on Rv2804c/- |
| Rv1845c/blaR | (cc=0.397) | info on Rv1845c/blaR |
| Rv3481c/- | (cc=0.3932) | info on Rv3481c/- |
| Rv1100/- | (cc=0.3866) | info on Rv1100/- |
| Rv2206/- | (cc=0.382) | info on Rv2206/- |
| Rv1020/mfd | (cc=0.3785) | info on Rv1020/mfd |
Correlation of Rv3665c/dppB with Rv1100/-
Normalized LFCs for Rv3665c/dppB:
(description and provenance of datasets)
| Rv3665c/dppB | Rv1100/- | |
| Fe_supp_jason_reseq | -0.365 | 0.071 |
| low_pH_jason_reseq | 2.515 | 4.725 |
| NO_jason_reseq | -1.982 | -0.536 |
| B6_jason_reseq | -2.162 | 0.163 |
| MHCII_jason_reseq | -1.4 | -2.608 |
| Isoniazid02 | -0.506 | -1.924 |
| Rifampicin4 | 0.165 | 1.313 |
| Ethambutol3 | 1.667 | 3.677 |
| Meropenem3 | -0.689 | 0.217 |
| Vancomycin16 | -0.111 | 0.151 |
| Rv2680_day32 | 0.573 | -0.057 |
| H37Rv_KO_MarP | -0.272 | -2.534 |
| hypoxia_3wks | 0.327 | -3.114 |
| hypoxia_6wks | -0.478 | -0.409 |
| glycerol | 0.654 | 0.462 |
| cholesterol | 0.854 | -0.628 |
| AJ | 0.751 | -1.548 |
| Bibs02 | 1.142 | 0.477 |
| Bibs02c | 0.474 | 0.9 |
| BL6 | 0.906 | 1.547 |
| BL6a | 0.062 | 1.314 |
| BXD01 | 0.0 | 2.85 |
| BXD010 | 0.8 | 2.169 |
| BXD011 | 0.078 | 2.573 |
| BXD03 | -0.135 | 1.751 |
| BXD04 | -0.524 | 4.268 |
| BXD05 | -0.636 | 2.301 |
| BXD06 | 0.233 | 3.125 |
| BXD07 | 0.279 | 2.398 |
| BXD08 | -0.442 | 2.205 |
| BXD09 | 0.488 | 2.056 |
| CAST | 1.185 | 1.844 |
| CCcont | 0.585 | 0.927 |
| DS01 | 0.975 | 0.89 |
| DS02 | 0.321 | 1.419 |
| DS04 | 1.744 | 1.029 |
| DS0c | 1.199 | 1.347 |
| GP01 | 0.699 | -0.554 |
| GP02 | -0.175 | -0.086 |
| GP0c | 0.834 | -0.603 |
| NOD | 0.205 | 0.405 |
| NZO | -0.663 | -0.25 |
| PWK | 0.0 | 1.742 |
| H37Rv_KO_CtpC | 1.949 | 3.317 |
| H37Rv_KO_CtpD | -0.316 | 0.942 |
| H37Rv_KO_Rv1272 | -1.067 | -0.791 |
| H37Rv_KO_SugABC | 1.302 | 0.4 |
| H37Rv_KO_MbtN | -0.715 | 1.323 |
| Trans05 | -1.5 | -0.254 |
| macrophage_unactivated | -0.593 | -1.348 |
| IL1 | -0.439 | -0.525 |
| Rapamycin | -1.099 | -1.547 |
| Tcell | 0.332 | 2.545 |
| GMCSF | -0.391 | -0.412 |
| IFNab | 0.502 | -2.304 |
| IFNg | -0.502 | 0.508 |
| IFNg_GMCSF1 | -1.266 | -0.49 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.646 | -0.782 |
| secA2_input | -0.167 | 0.178 |
| delta_Rv3594 | -1.071 | -1.877 |
| delta_Rv3717 | -1.33 | -1.65 |
| delta_Rv3811 | -0.674 | -1.196 |
| delta_Rv0954 | -0.111 | -1.523 |
| PonA1 | -0.316 | -0.463 |
| EccD1_KO | -1.168 | 0.474 |
| EspI_KO | 0.493 | -0.707 |
| PE35_KO | -0.236 | -1.138 |
| PPE68_KO | -0.928 | -1.494 |
| glycerol2 | 0.261 | -3.224 |
| lignocerate | 0.06 | -1.095 |
| oleate | -0.345 | -3.756 |
| phosphatidylcholine | 0.492 | -1.315 |
| acetate | -0.216 | 0.69 |
| glucAc | -0.554 | 0.736 |
| Rv0950ko | -0.178 | -0.075 |
| Rv1096ko | 0.172 | 1.484 |
| Rv3684ko | -0.498 | -0.419 |
| delta_otsA_trehalose | -2.907 | -0.391 |