Top 10 genes with highest correlation to Rv3664c/dppC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1726/- | (cc=0.5365) | info on Rv1726/- |
| Rv3468c/- | (cc=0.4615) | info on Rv3468c/- |
| Rv3077/- | (cc=0.4584) | info on Rv3077/- |
| Rv2262c/- | (cc=0.4551) | info on Rv2262c/- |
| Rv3742c/- | (cc=0.4543) | info on Rv3742c/- |
| Rv3843c/- | (cc=0.4359) | info on Rv3843c/- |
| Rv1511/gmdA | (cc=0.4333) | info on Rv1511/gmdA |
| Rv0118c/oxcA | (cc=0.4214) | info on Rv0118c/oxcA |
| Rv1563c/treY | (cc=0.4163) | info on Rv1563c/treY |
| Rv3839/- | (cc=0.414) | info on Rv3839/- |
Correlation of Rv3664c/dppC with Rv1726/-
Normalized LFCs for Rv3664c/dppC:
(description and provenance of datasets)
| Rv3664c/dppC | Rv1726/- | |
| Fe_supp_jason_reseq | 0.0 | -0.541 |
| low_pH_jason_reseq | 1.307 | -0.502 |
| NO_jason_reseq | -1.42 | 0.727 |
| B6_jason_reseq | 0.357 | 0.182 |
| MHCII_jason_reseq | 1.02 | 0.394 |
| Isoniazid02 | -2.206 | -2.193 |
| Rifampicin4 | 0.439 | -0.623 |
| Ethambutol3 | -1.709 | -1.188 |
| Meropenem3 | -1.816 | -2.035 |
| Vancomycin16 | -1.525 | -0.942 |
| Rv2680_day32 | -0.816 | -0.623 |
| H37Rv_KO_MarP | 0.896 | -0.144 |
| hypoxia_3wks | 0.279 | 0.343 |
| hypoxia_6wks | -1.539 | 0.198 |
| glycerol | -0.117 | -0.032 |
| cholesterol | 0.118 | -0.173 |
| AJ | -0.067 | 0.82 |
| Bibs02 | 0.0 | 0.009 |
| Bibs02c | -0.185 | 0.142 |
| BL6 | 0.367 | 0.437 |
| BL6a | 0.0 | -0.065 |
| BXD01 | -1.323 | -0.306 |
| BXD010 | 0.531 | -0.362 |
| BXD011 | -0.576 | -0.674 |
| BXD03 | 0.706 | -0.154 |
| BXD04 | -0.148 | 0.506 |
| BXD05 | -1.094 | -0.316 |
| BXD06 | -0.077 | 0.049 |
| BXD07 | -1.043 | -0.493 |
| BXD08 | -1.255 | -0.089 |
| BXD09 | -0.635 | -0.283 |
| CAST | 0.0 | -0.494 |
| CCcont | -0.276 | -0.928 |
| DS01 | 1.193 | 0.577 |
| DS02 | 1.695 | 0.843 |
| DS04 | 1.934 | 1.304 |
| DS0c | 0.341 | 0.0 |
| GP01 | -1.252 | 0.433 |
| GP02 | -0.785 | 0.396 |
| GP0c | -1.53 | -0.462 |
| NOD | -0.654 | -0.604 |
| NZO | -1.503 | -0.11 |
| PWK | -0.057 | -0.344 |
| H37Rv_KO_CtpC | -0.3 | -0.175 |
| H37Rv_KO_CtpD | -1.109 | 0.862 |
| H37Rv_KO_Rv1272 | -0.411 | 0.0 |
| H37Rv_KO_SugABC | -0.057 | 1.181 |
| H37Rv_KO_MbtN | -0.903 | -0.13 |
| Trans05 | 0.59 | 0.379 |
| macrophage_unactivated | -0.701 | 0.243 |
| IL1 | -0.317 | 0.285 |
| Rapamycin | 0.0 | 0.568 |
| Tcell | 0.326 | 0.342 |
| GMCSF | -0.75 | 0.227 |
| IFNab | -0.323 | 0.26 |
| IFNg | -0.139 | 0.401 |
| IFNg_GMCSF1 | -0.698 | 0.899 |
| Rv1432_day32 | -0.984 | 0.567 |
| Rv1565c_day32 | 0.408 | 0.676 |
| secA2_input | -1.481 | 0.147 |
| delta_Rv3594 | -0.615 | -0.303 |
| delta_Rv3717 | 0.686 | -0.18 |
| delta_Rv3811 | -0.059 | 0.126 |
| delta_Rv0954 | 0.145 | 0.121 |
| PonA1 | -0.792 | 0.14 |
| EccD1_KO | -1.184 | -0.237 |
| EspI_KO | -0.379 | -0.077 |
| PE35_KO | -1.645 | -0.578 |
| PPE68_KO | -1.421 | -0.381 |
| glycerol2 | -0.929 | -0.147 |
| lignocerate | -0.415 | -0.057 |
| oleate | -0.94 | -0.22 |
| phosphatidylcholine | -0.478 | 0.063 |
| acetate | 1.25 | -0.362 |
| glucAc | 0.631 | -0.503 |
| Rv0950ko | 0.0 | 0.247 |
| Rv1096ko | 0.395 | 1.188 |
| Rv3684ko | 0.632 | 0.583 |
| delta_otsA_trehalose | 3.458 | 2.62 |