Top 10 genes with highest correlation to Rv3660c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0532/PE_PGRS6 | (cc=0.5743) | info on Rv0532/PE_PGRS6 |
| Rv0478/deoC | (cc=0.5656) | info on Rv0478/deoC |
| Rv3174/- | (cc=0.4979) | info on Rv3174/- |
| Rv3273/- | (cc=0.4603) | info on Rv3273/- |
| Rv2333c/stp | (cc=0.4425) | info on Rv2333c/stp |
| Rv0533c/fabH | (cc=0.4363) | info on Rv0533c/fabH |
| Rv3172c/- | (cc=0.4285) | info on Rv3172c/- |
| Rv1765A/- | (cc=0.4195) | info on Rv1765A/- |
| Rv1579c/- | (cc=0.4125) | info on Rv1579c/- |
| Rv3173c/- | (cc=0.4091) | info on Rv3173c/- |
Correlation of Rv3660c/- with Rv1765A/-
Normalized LFCs for Rv3660c/-:
(description and provenance of datasets)
| Rv3660c/- | Rv1765A/- | |
| Fe_supp_jason_reseq | -1.174 | -0.44 |
| low_pH_jason_reseq | -0.39 | -0.599 |
| NO_jason_reseq | -1.68 | -0.042 |
| B6_jason_reseq | 1.384 | 0.274 |
| MHCII_jason_reseq | 1.631 | -0.993 |
| Isoniazid02 | 2.734 | 1.425 |
| Rifampicin4 | 0.926 | -1.641 |
| Ethambutol3 | 3.112 | -0.392 |
| Meropenem3 | -0.031 | -0.155 |
| Vancomycin16 | 0.687 | 0.0 |
| Rv2680_day32 | -0.642 | 0.754 |
| H37Rv_KO_MarP | -0.305 | -0.6 |
| hypoxia_3wks | 0.148 | -0.475 |
| hypoxia_6wks | 0.43 | 0.146 |
| glycerol | 0.12 | 0.961 |
| cholesterol | -0.495 | 0.282 |
| AJ | -1.084 | -2.398 |
| Bibs02 | 1.15 | 0.886 |
| Bibs02c | 1.05 | 1.652 |
| BL6 | 0.745 | 1.184 |
| BL6a | 0.707 | 2.309 |
| BXD01 | -0.098 | 0.405 |
| BXD010 | 1.04 | 1.696 |
| BXD011 | -0.182 | 1.06 |
| BXD03 | 0.017 | 0.407 |
| BXD04 | 0.142 | 0.854 |
| BXD05 | 0.735 | 1.129 |
| BXD06 | 0.211 | 0.26 |
| BXD07 | 0.128 | 1.11 |
| BXD08 | 1.08 | 0.317 |
| BXD09 | 1.01 | 1.475 |
| CAST | -1.784 | -0.712 |
| CCcont | 1.045 | 1.225 |
| DS01 | 0.517 | 0.298 |
| DS02 | 0.939 | -1.757 |
| DS04 | -0.943 | -1.255 |
| DS0c | 1.856 | 0.995 |
| GP01 | -0.257 | 0.136 |
| GP02 | 0.01 | -1.558 |
| GP0c | 0.442 | -0.334 |
| NOD | -0.693 | -0.578 |
| NZO | 0.185 | -2.373 |
| PWK | -1.469 | -1.763 |
| H37Rv_KO_CtpC | -0.668 | -1.011 |
| H37Rv_KO_CtpD | -0.079 | -0.819 |
| H37Rv_KO_Rv1272 | -0.58 | 2.705 |
| H37Rv_KO_SugABC | -1.619 | -1.855 |
| H37Rv_KO_MbtN | -0.938 | -1.363 |
| Trans05 | -0.661 | 0.366 |
| macrophage_unactivated | -0.328 | -0.701 |
| IL1 | 0.059 | 0.65 |
| Rapamycin | 0.267 | -0.341 |
| Tcell | -0.74 | -0.336 |
| GMCSF | 0.61 | -0.681 |
| IFNab | 1.046 | 0.181 |
| IFNg | 0.158 | -0.917 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | -0.505 | 1.068 |
| Rv1565c_day32 | 1.305 | -0.226 |
| secA2_input | 0.044 | -2.049 |
| delta_Rv3594 | -0.702 | -1.885 |
| delta_Rv3717 | -1.034 | -1.47 |
| delta_Rv3811 | -0.654 | -1.737 |
| delta_Rv0954 | -0.284 | -0.3 |
| PonA1 | -1.551 | -1.422 |
| EccD1_KO | -0.414 | 2.845 |
| EspI_KO | -0.234 | 1.309 |
| PE35_KO | 0.0 | 1.286 |
| PPE68_KO | 0.189 | 1.587 |
| glycerol2 | 0.052 | 1.424 |
| lignocerate | 1.073 | 2.435 |
| oleate | -2.535 | -2.115 |
| phosphatidylcholine | 0.783 | 1.931 |
| acetate | 2.173 | 2.229 |
| glucAc | 2.153 | 2.269 |
| Rv0950ko | 0.422 | -0.103 |
| Rv1096ko | 0.489 | 0.449 |
| Rv3684ko | -1.385 | 1.333 |
| delta_otsA_trehalose | 0.19 | -0.939 |