Top 10 genes with highest correlation to Rv3647c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2410c/- | (cc=0.5585) | info on Rv2410c/- |
| Rv3058c/- | (cc=0.5214) | info on Rv3058c/- |
| Rv3059/cyp136 | (cc=0.5198) | info on Rv3059/cyp136 |
| Rv2633c/- | (cc=0.5107) | info on Rv2633c/- |
| Rv1901/cinA | (cc=0.4881) | info on Rv1901/cinA |
| Rv0713/- | (cc=0.4862) | info on Rv0713/- |
| Rv2566/- | (cc=0.4837) | info on Rv2566/- |
| Rv0692/- | (cc=0.4825) | info on Rv0692/- |
| Rv0136/cyp138 | (cc=0.4797) | info on Rv0136/cyp138 |
| Rv2411c/- | (cc=0.4784) | info on Rv2411c/- |
Correlation of Rv3647c/- with Rv0136/cyp138
Normalized LFCs for Rv3647c/-:
(description and provenance of datasets)
| Rv3647c/- | Rv0136/cyp138 | |
| Fe_supp_jason_reseq | 0.193 | -0.399 |
| low_pH_jason_reseq | -0.99 | 0.062 |
| NO_jason_reseq | 0.228 | -0.436 |
| B6_jason_reseq | 1.211 | 1.033 |
| MHCII_jason_reseq | -0.356 | 0.94 |
| Isoniazid02 | -3.804 | -0.674 |
| Rifampicin4 | 0.076 | 0.081 |
| Ethambutol3 | -1.052 | 0.119 |
| Meropenem3 | 1.291 | -0.53 |
| Vancomycin16 | -0.594 | -0.279 |
| Rv2680_day32 | 0.227 | 0.381 |
| H37Rv_KO_MarP | 0.586 | 0.604 |
| hypoxia_3wks | 1.081 | 0.108 |
| hypoxia_6wks | 0.651 | 0.601 |
| glycerol | -1.97 | -1.565 |
| cholesterol | -0.923 | -1.209 |
| AJ | -1.652 | 0.366 |
| Bibs02 | -1.106 | -0.246 |
| Bibs02c | -2.352 | -0.355 |
| BL6 | -0.122 | -0.418 |
| BL6a | -1.918 | -0.73 |
| BXD01 | -1.488 | -0.861 |
| BXD010 | -1.049 | -0.353 |
| BXD011 | -1.104 | -0.795 |
| BXD03 | -2.524 | -0.95 |
| BXD04 | -0.484 | -1.025 |
| BXD05 | -2.189 | -0.967 |
| BXD06 | -0.594 | -0.847 |
| BXD07 | -1.569 | -1.073 |
| BXD08 | -0.893 | -0.598 |
| BXD09 | -1.415 | -0.85 |
| CAST | -0.425 | 0.093 |
| CCcont | -2.305 | -1.132 |
| DS01 | -2.553 | -0.296 |
| DS02 | -1.81 | -0.961 |
| DS04 | -2.032 | -0.386 |
| DS0c | -1.584 | -0.368 |
| GP01 | -0.986 | -1.008 |
| GP02 | -1.599 | 0.164 |
| GP0c | -2.314 | -0.838 |
| NOD | -1.162 | 0.091 |
| NZO | -0.728 | 0.286 |
| PWK | -0.212 | 0.095 |
| H37Rv_KO_CtpC | 1.286 | -0.55 |
| H37Rv_KO_CtpD | -1.922 | -1.034 |
| H37Rv_KO_Rv1272 | -1.786 | -0.984 |
| H37Rv_KO_SugABC | -0.845 | -0.604 |
| H37Rv_KO_MbtN | -0.329 | 0.014 |
| Trans05 | -0.505 | 0.104 |
| macrophage_unactivated | -1.455 | -0.597 |
| IL1 | 0.234 | -1.258 |
| Rapamycin | -2.409 | -0.724 |
| Tcell | 1.049 | -0.929 |
| GMCSF | -0.499 | -0.378 |
| IFNab | -1.539 | -0.432 |
| IFNg | -0.874 | -0.919 |
| IFNg_GMCSF1 | -1.599 | -0.896 |
| Rv1432_day32 | -1.304 | 1.098 |
| Rv1565c_day32 | -0.877 | 0.655 |
| secA2_input | -0.434 | 0.792 |
| delta_Rv3594 | -0.372 | -0.737 |
| delta_Rv3717 | 0.851 | -0.788 |
| delta_Rv3811 | -0.626 | -0.446 |
| delta_Rv0954 | -1.671 | -0.342 |
| PonA1 | -0.029 | -0.11 |
| EccD1_KO | 0.263 | 0.115 |
| EspI_KO | 0.325 | 0.214 |
| PE35_KO | 0.137 | -0.166 |
| PPE68_KO | 0.733 | 0.09 |
| glycerol2 | 1.342 | 1.229 |
| lignocerate | 1.002 | 0.911 |
| oleate | 1.275 | 1.002 |
| phosphatidylcholine | 1.401 | 0.871 |
| acetate | -0.143 | 0.505 |
| glucAc | 0.378 | 0.432 |
| Rv0950ko | -1.309 | 0.268 |
| Rv1096ko | -1.194 | -0.045 |
| Rv3684ko | -0.937 | -0.18 |
| delta_otsA_trehalose | 2.392 | -0.022 |