Top 10 genes with highest correlation to Rv3618/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3786c/- | (cc=0.573) | info on Rv3786c/- |
| Rv0312/- | (cc=0.5) | info on Rv0312/- |
| Rv1062/- | (cc=0.4966) | info on Rv1062/- |
| Rv2813/- | (cc=0.4937) | info on Rv2813/- |
| Rv3335c/- | (cc=0.4756) | info on Rv3335c/- |
| Rv0060/- | (cc=0.4688) | info on Rv0060/- |
| Rv3428c/- | (cc=0.4632) | info on Rv3428c/- |
| Rv2237/- | (cc=0.455) | info on Rv2237/- |
| Rv0445c/sigK | (cc=0.4529) | info on Rv0445c/sigK |
| Rv3703c/- | (cc=0.4512) | info on Rv3703c/- |
Correlation of Rv3618/- with Rv3428c/-
Normalized LFCs for Rv3618/-:
(description and provenance of datasets)
| Rv3618/- | Rv3428c/- | |
| Fe_supp_jason_reseq | -0.065 | -0.579 |
| low_pH_jason_reseq | -0.505 | -1.266 |
| NO_jason_reseq | -0.053 | -0.583 |
| B6_jason_reseq | -0.153 | 0.477 |
| MHCII_jason_reseq | 0.652 | -1.066 |
| Isoniazid02 | 0.0 | -0.873 |
| Rifampicin4 | -0.485 | -0.257 |
| Ethambutol3 | -0.033 | -0.908 |
| Meropenem3 | -0.065 | 1.422 |
| Vancomycin16 | -0.096 | -0.618 |
| Rv2680_day32 | -0.956 | -0.134 |
| H37Rv_KO_MarP | 0.04 | -0.308 |
| hypoxia_3wks | -0.355 | -4.147 |
| hypoxia_6wks | -0.405 | -2.343 |
| glycerol | 0.209 | -0.038 |
| cholesterol | 0.377 | -0.498 |
| AJ | 0.435 | -0.269 |
| Bibs02 | -0.538 | 0.695 |
| Bibs02c | -0.271 | 0.0 |
| BL6 | 0.362 | 0.268 |
| BL6a | 0.026 | -0.075 |
| BXD01 | -0.217 | -0.125 |
| BXD010 | -0.334 | 0.437 |
| BXD011 | 0.064 | -0.769 |
| BXD03 | 0.068 | 0.311 |
| BXD04 | -0.244 | -0.222 |
| BXD05 | 0.459 | -0.812 |
| BXD06 | -0.163 | 0.286 |
| BXD07 | -0.027 | 0.025 |
| BXD08 | -0.262 | 0.454 |
| BXD09 | 0.07 | -0.079 |
| CAST | 0.185 | 0.164 |
| CCcont | 0.129 | 0.276 |
| DS01 | -0.394 | 0.043 |
| DS02 | 0.187 | 1.137 |
| DS04 | -0.142 | 0.202 |
| DS0c | -0.234 | 0.297 |
| GP01 | -0.233 | -1.608 |
| GP02 | -0.47 | -0.65 |
| GP0c | -0.777 | -0.551 |
| NOD | 1.699 | 4.327 |
| NZO | 0.416 | 0.107 |
| PWK | 0.388 | 0.331 |
| H37Rv_KO_CtpC | -0.234 | -1.269 |
| H37Rv_KO_CtpD | -0.26 | -0.646 |
| H37Rv_KO_Rv1272 | -0.579 | 0.124 |
| H37Rv_KO_SugABC | 1.365 | 1.294 |
| H37Rv_KO_MbtN | 0.154 | -0.231 |
| Trans05 | -0.104 | 0.463 |
| macrophage_unactivated | -0.287 | -0.559 |
| IL1 | -0.424 | 0.24 |
| Rapamycin | 0.399 | -0.086 |
| Tcell | -0.033 | -0.375 |
| GMCSF | 0.594 | -0.227 |
| IFNab | -0.151 | 0.323 |
| IFNg | 0.128 | -0.823 |
| IFNg_GMCSF1 | 0.886 | -0.657 |
| Rv1432_day32 | 0.12 | 0.046 |
| Rv1565c_day32 | -1.06 | -0.166 |
| secA2_input | 0.618 | -0.216 |
| delta_Rv3594 | 0.471 | 0.707 |
| delta_Rv3717 | 0.513 | -0.511 |
| delta_Rv3811 | 0.7 | -0.082 |
| delta_Rv0954 | 0.072 | -1.912 |
| PonA1 | 0.42 | -0.097 |
| EccD1_KO | -0.237 | -0.582 |
| EspI_KO | -0.827 | -0.813 |
| PE35_KO | -0.053 | -0.28 |
| PPE68_KO | 0.0 | 0.0 |
| glycerol2 | 0.891 | 0.383 |
| lignocerate | 1.001 | 1.254 |
| oleate | -0.231 | -0.086 |
| phosphatidylcholine | 0.913 | 0.762 |
| acetate | 1.084 | 1.285 |
| glucAc | 1.245 | 1.415 |
| Rv0950ko | 0.691 | -0.498 |
| Rv1096ko | 0.283 | 0.754 |
| Rv3684ko | 0.658 | 0.763 |
| delta_otsA_trehalose | 0.168 | -1.198 |