Top 10 genes with highest correlation to Rv3584/lpqE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0051/- | (cc=0.5822) | info on Rv0051/- |
| Rv1321/- | (cc=0.5199) | info on Rv1321/- |
| Rv2427c/proA | (cc=0.5086) | info on Rv2427c/proA |
| Rv1520/- | (cc=0.5077) | info on Rv1520/- |
| Rv2970A/- | (cc=0.4782) | info on Rv2970A/- |
| Rv3214/gpm2 | (cc=0.4755) | info on Rv3214/gpm2 |
| Rv1207/folP2 | (cc=0.4749) | info on Rv1207/folP2 |
| Rv0246/- | (cc=0.4725) | info on Rv0246/- |
| Rv3835/- | (cc=0.4649) | info on Rv3835/- |
| Rv0728c/serA2 | (cc=0.4608) | info on Rv0728c/serA2 |
Correlation of Rv3584/lpqE with Rv0728c/serA2
Normalized LFCs for Rv3584/lpqE:
(description and provenance of datasets)
| Rv3584/lpqE | Rv0728c/serA2 | |
| Fe_supp_jason_reseq | 0.696 | 0.584 |
| low_pH_jason_reseq | 1.337 | -0.744 |
| NO_jason_reseq | -1.775 | -0.494 |
| B6_jason_reseq | -1.071 | -0.184 |
| MHCII_jason_reseq | -1.855 | -0.151 |
| Isoniazid02 | 0.745 | 0.068 |
| Rifampicin4 | 1.032 | 0.349 |
| Ethambutol3 | 2.813 | 0.0 |
| Meropenem3 | 3.481 | 1.656 |
| Vancomycin16 | 0.117 | 0.822 |
| Rv2680_day32 | 0.223 | -0.252 |
| H37Rv_KO_MarP | -0.056 | 0.246 |
| hypoxia_3wks | -0.861 | 0.387 |
| hypoxia_6wks | -0.464 | 0.679 |
| glycerol | -2.035 | -0.471 |
| cholesterol | -0.775 | -0.371 |
| AJ | -0.977 | 0.282 |
| Bibs02 | -0.62 | -0.832 |
| Bibs02c | -2.166 | 0.42 |
| BL6 | 0.257 | 0.407 |
| BL6a | -0.095 | 0.336 |
| BXD01 | 0.783 | 0.242 |
| BXD010 | 0.645 | 0.989 |
| BXD011 | 1.338 | 1.865 |
| BXD03 | 0.837 | 0.127 |
| BXD04 | 1.091 | 0.472 |
| BXD05 | 1.053 | 0.818 |
| BXD06 | 1.089 | 0.666 |
| BXD07 | 0.952 | 0.462 |
| BXD08 | 1.162 | 0.752 |
| BXD09 | 0.73 | 0.624 |
| CAST | 1.054 | 0.342 |
| CCcont | -0.048 | -0.076 |
| DS01 | -0.994 | -0.26 |
| DS02 | -0.069 | -0.969 |
| DS04 | -0.672 | -0.707 |
| DS0c | -1.758 | -0.625 |
| GP01 | 1.018 | -0.703 |
| GP02 | 0.607 | -1.195 |
| GP0c | 0.306 | -0.776 |
| NOD | 0.801 | -0.456 |
| NZO | -0.764 | 0.538 |
| PWK | -0.708 | -0.151 |
| H37Rv_KO_CtpC | 0.537 | 0.896 |
| H37Rv_KO_CtpD | -2.359 | -1.949 |
| H37Rv_KO_Rv1272 | 0.315 | 0.626 |
| H37Rv_KO_SugABC | 0.997 | 0.361 |
| H37Rv_KO_MbtN | -0.32 | 0.712 |
| Trans05 | 0.531 | 0.327 |
| macrophage_unactivated | 0.271 | 0.0 |
| IL1 | -0.831 | 0.056 |
| Rapamycin | 0.617 | 0.678 |
| Tcell | 0.619 | 0.244 |
| GMCSF | -0.842 | 0.116 |
| IFNab | 0.115 | 0.0 |
| IFNg | 0.166 | 0.361 |
| IFNg_GMCSF1 | 0.581 | 0.71 |
| Rv1432_day32 | 0.258 | 1.709 |
| Rv1565c_day32 | 0.0 | 0.392 |
| secA2_input | 0.124 | 0.044 |
| delta_Rv3594 | -0.75 | -1.418 |
| delta_Rv3717 | -1.207 | -0.603 |
| delta_Rv3811 | -0.519 | -0.931 |
| delta_Rv0954 | -1.01 | -0.848 |
| PonA1 | 0.209 | 0.07 |
| EccD1_KO | -0.483 | 0.026 |
| EspI_KO | -0.85 | 0.242 |
| PE35_KO | -1.339 | -0.166 |
| PPE68_KO | -1.225 | -0.624 |
| glycerol2 | -0.755 | 0.242 |
| lignocerate | 0.051 | 0.407 |
| oleate | -0.441 | 0.047 |
| phosphatidylcholine | 0.048 | 0.113 |
| acetate | -0.332 | -0.113 |
| glucAc | -0.447 | 0.116 |
| Rv0950ko | -0.534 | 0.078 |
| Rv1096ko | 1.037 | -0.133 |
| Rv3684ko | -0.206 | -0.413 |
| delta_otsA_trehalose | 0.51 | -0.68 |