Top 10 genes with highest correlation to Rv3583c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.5322) | info on Rv2290/lppO |
| Rv3302c/glpD2 | (cc=0.4879) | info on Rv3302c/glpD2 |
| Rv2051c/ppm1 | (cc=0.474) | info on Rv2051c/ppm1 |
| Rv1122/gnd2 | (cc=0.4731) | info on Rv1122/gnd2 |
| Rv1298/rpmE | (cc=0.4666) | info on Rv1298/rpmE |
| Rv2535c/pepQ | (cc=0.4664) | info on Rv2535c/pepQ |
| Rv3043c/ctaD | (cc=0.4618) | info on Rv3043c/ctaD |
| Rv3193c/- | (cc=0.4454) | info on Rv3193c/- |
| Rv0526/- | (cc=0.4333) | info on Rv0526/- |
| Rv1456c/- | (cc=0.4292) | info on Rv1456c/- |
Correlation of Rv3583c/- with Rv2290/lppO
Normalized LFCs for Rv3583c/-:
(description and provenance of datasets)
| Rv3583c/- | Rv2290/lppO | |
| Fe_supp_jason_reseq | 0.706 | 0.537 |
| low_pH_jason_reseq | -0.231 | -0.182 |
| NO_jason_reseq | 0.331 | -0.06 |
| B6_jason_reseq | -0.153 | 0.398 |
| MHCII_jason_reseq | -0.135 | 0.099 |
| Isoniazid02 | -0.706 | -0.336 |
| Rifampicin4 | -0.601 | -1.064 |
| Ethambutol3 | 0.0 | -0.545 |
| Meropenem3 | -0.128 | -0.736 |
| Vancomycin16 | -0.589 | -0.438 |
| Rv2680_day32 | 0.0 | -0.222 |
| H37Rv_KO_MarP | -0.371 | 0.792 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | 0.0 | 0.167 |
| glycerol | 0.385 | -0.012 |
| cholesterol | 0.276 | -0.244 |
| AJ | 0.0 | 0.027 |
| Bibs02 | 0.0 | 0.813 |
| Bibs02c | 0.0 | 0.129 |
| BL6 | 0.343 | 0.556 |
| BL6a | 0.198 | 0.288 |
| BXD01 | 0.0 | -0.892 |
| BXD010 | 0.0 | 0.448 |
| BXD011 | 1.109 | 0.75 |
| BXD03 | 0.371 | 0.257 |
| BXD04 | 0.0 | 0.135 |
| BXD05 | 0.0 | 0.658 |
| BXD06 | 0.0 | 0.075 |
| BXD07 | 0.0 | 0.07 |
| BXD08 | 0.365 | 0.008 |
| BXD09 | 0.14 | 0.358 |
| CAST | 0.23 | -0.312 |
| CCcont | 0.525 | -0.026 |
| DS01 | 0.0 | 0.014 |
| DS02 | 0.0 | -0.309 |
| DS04 | 0.0 | 0.011 |
| DS0c | 0.0 | -0.366 |
| GP01 | 0.0 | 0.26 |
| GP02 | 0.0 | 0.0 |
| GP0c | 0.0 | -0.57 |
| NOD | 0.0 | 0.592 |
| NZO | 0.0 | -0.107 |
| PWK | 0.0 | -0.117 |
| H37Rv_KO_CtpC | 0.0 | 0.228 |
| H37Rv_KO_CtpD | 0.127 | -0.867 |
| H37Rv_KO_Rv1272 | 0.0 | -0.421 |
| H37Rv_KO_SugABC | 0.0 | 0.271 |
| H37Rv_KO_MbtN | 1.286 | 0.253 |
| Trans05 | 0.0 | -0.331 |
| macrophage_unactivated | 0.701 | -0.123 |
| IL1 | -0.374 | -0.442 |
| Rapamycin | 0.681 | -0.264 |
| Tcell | -0.857 | -0.652 |
| GMCSF | 1.096 | 0.214 |
| IFNab | 0.348 | -0.408 |
| IFNg | -0.337 | 0.102 |
| IFNg_GMCSF1 | 1.012 | 1.59 |
| Rv1432_day32 | 0.0 | 0.332 |
| Rv1565c_day32 | 0.0 | 0.302 |
| secA2_input | 1.061 | -0.935 |
| delta_Rv3594 | 0.0 | 1.213 |
| delta_Rv3717 | 0.477 | 0.339 |
| delta_Rv3811 | 0.0 | 0.663 |
| delta_Rv0954 | 0.178 | -0.09 |
| PonA1 | 2.179 | 0.436 |
| EccD1_KO | 0.73 | 0.556 |
| EspI_KO | -0.359 | 0.311 |
| PE35_KO | 0.0 | 1.0 |
| PPE68_KO | 0.368 | 0.621 |
| glycerol2 | -0.82 | -1.833 |
| lignocerate | -0.712 | -2.314 |
| oleate | -0.829 | -1.733 |
| phosphatidylcholine | -0.819 | -2.438 |
| acetate | -0.973 | -3.262 |
| glucAc | -0.605 | -1.611 |
| Rv0950ko | 0.0 | 0.537 |
| Rv1096ko | 0.0 | -0.588 |
| Rv3684ko | -0.452 | -0.743 |
| delta_otsA_trehalose | 0.0 | -0.472 |