Top 10 genes with highest correlation to Rv3525c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2061c/- | (cc=0.5587) | info on Rv2061c/- |
| Rv3572/- | (cc=0.5147) | info on Rv3572/- |
| Rv1365c/rsfA | (cc=0.4917) | info on Rv1365c/rsfA |
| Rv1615/- | (cc=0.4581) | info on Rv1615/- |
| Rv0921/- | (cc=0.451) | info on Rv0921/- |
| Rv1148c/- | (cc=0.4338) | info on Rv1148c/- |
| Rv3233c/- | (cc=0.4288) | info on Rv3233c/- |
| Rv1268c/- | (cc=0.4287) | info on Rv1268c/- |
| Rv2854/- | (cc=0.4258) | info on Rv2854/- |
| Rv2313c/- | (cc=0.4252) | info on Rv2313c/- |
Correlation of Rv3525c/- with Rv2061c/-
Normalized LFCs for Rv3525c/-:
(description and provenance of datasets)
| Rv3525c/- | Rv2061c/- | |
| Fe_supp_jason_reseq | -0.846 | -0.24 |
| low_pH_jason_reseq | -0.386 | 1.166 |
| NO_jason_reseq | -0.69 | 0.021 |
| B6_jason_reseq | -0.584 | 0.145 |
| MHCII_jason_reseq | -0.066 | 0.051 |
| Isoniazid02 | -2.03 | -2.865 |
| Rifampicin4 | 0.56 | 0.463 |
| Ethambutol3 | -1.992 | -2.36 |
| Meropenem3 | -2.554 | -1.973 |
| Vancomycin16 | -0.915 | -0.87 |
| Rv2680_day32 | 1.002 | 0.067 |
| H37Rv_KO_MarP | 1.054 | 0.838 |
| hypoxia_3wks | 0.566 | -0.088 |
| hypoxia_6wks | 0.081 | 0.069 |
| glycerol | -0.012 | -0.685 |
| cholesterol | -0.776 | -0.847 |
| AJ | 0.066 | -0.087 |
| Bibs02 | 0.584 | 1.325 |
| Bibs02c | -0.309 | 0.887 |
| BL6 | -0.288 | -0.542 |
| BL6a | 0.247 | 0.97 |
| BXD01 | -0.788 | -0.037 |
| BXD010 | -0.314 | 0.502 |
| BXD011 | -0.197 | 0.229 |
| BXD03 | 0.133 | -0.423 |
| BXD04 | -0.605 | 0.935 |
| BXD05 | 0.323 | 0.21 |
| BXD06 | -0.356 | 0.759 |
| BXD07 | -0.169 | 0.147 |
| BXD08 | -0.752 | 0.452 |
| BXD09 | -0.208 | 0.37 |
| CAST | 0.287 | -0.721 |
| CCcont | -0.982 | -0.626 |
| DS01 | 0.08 | 1.073 |
| DS02 | -1.144 | 0.176 |
| DS04 | 0.561 | 0.333 |
| DS0c | -1.021 | -0.652 |
| GP01 | -1.589 | -1.547 |
| GP02 | -1.539 | -1.873 |
| GP0c | -1.783 | -2.341 |
| NOD | -0.093 | -1.103 |
| NZO | -0.669 | -0.075 |
| PWK | 0.213 | 0.627 |
| H37Rv_KO_CtpC | -0.284 | 0.758 |
| H37Rv_KO_CtpD | -1.105 | -1.788 |
| H37Rv_KO_Rv1272 | -0.589 | 0.833 |
| H37Rv_KO_SugABC | -1.767 | 0.009 |
| H37Rv_KO_MbtN | 0.654 | 1.646 |
| Trans05 | 0.029 | 0.314 |
| macrophage_unactivated | 0.603 | 0.455 |
| IL1 | -0.555 | 1.711 |
| Rapamycin | 0.344 | 0.408 |
| Tcell | 0.336 | 0.736 |
| GMCSF | 0.504 | 1.201 |
| IFNab | 0.732 | 0.402 |
| IFNg | 0.601 | 0.861 |
| IFNg_GMCSF1 | 0.091 | 1.562 |
| Rv1432_day32 | -0.103 | -0.597 |
| Rv1565c_day32 | -0.074 | -0.494 |
| secA2_input | -0.809 | -1.061 |
| delta_Rv3594 | 0.127 | -0.722 |
| delta_Rv3717 | -0.355 | -1.058 |
| delta_Rv3811 | 0.241 | -1.419 |
| delta_Rv0954 | -0.298 | -1.026 |
| PonA1 | -0.089 | -0.372 |
| EccD1_KO | 0.309 | -0.891 |
| EspI_KO | -1.569 | -0.499 |
| PE35_KO | -0.236 | -1.234 |
| PPE68_KO | -0.173 | -1.789 |
| glycerol2 | -0.804 | -0.056 |
| lignocerate | -1.136 | -0.761 |
| oleate | -0.405 | 0.926 |
| phosphatidylcholine | -0.606 | 0.459 |
| acetate | -1.298 | 0.281 |
| glucAc | -1.615 | -2.954 |
| Rv0950ko | 0.09 | -1.306 |
| Rv1096ko | 0.262 | -0.464 |
| Rv3684ko | -0.167 | 0.481 |
| delta_otsA_trehalose | -1.098 | -0.053 |