TnSeqCorr

Top 10 genes with highest correlation to Rv3513c/fadD18:

update plotcorrelationlink to info on gene
Rv0648/- (cc=0.4783) info on Rv0648/-
Rv0110/- (cc=0.4751) info on Rv0110/-
Rv2088/pknJ (cc=0.4742) info on Rv2088/pknJ
Rv0194/- (cc=0.4727) info on Rv0194/-
Rv3026c/- (cc=0.4533) info on Rv3026c/-
Rv0144/- (cc=0.4532) info on Rv0144/-
Rv0134/ephF (cc=0.4496) info on Rv0134/ephF
Rv1163/narJ (cc=0.4484) info on Rv1163/narJ
Rv0376c/- (cc=0.4431) info on Rv0376c/-
Rv1533/- (cc=0.4311) info on Rv1533/-

Correlation of Rv3513c/fadD18 with Rv0648/-

Normalized LFCs for Rv3513c/fadD18:
(description and provenance of datasets)
Rv3513c/fadD18Rv0648/-
Fe_supp_jason_reseq

0.587

-0.423

low_pH_jason_reseq

-1.405

-0.159

NO_jason_reseq

-0.641

-0.06

B6_jason_reseq

-0.099

0.75

MHCII_jason_reseq

0.442

0.848

Isoniazid02

0.064

0.311

Rifampicin4

0.219

0.485

Ethambutol3

-0.258

0.174

Meropenem3

-0.527

0.625

Vancomycin16

-0.446

-0.077

Rv2680_day32

0.057

0.089

H37Rv_KO_MarP

0.079

0.251

hypoxia_3wks

0.267

0.124

hypoxia_6wks

0.161

0.127

glycerol

-0.006

1.027

cholesterol

-0.232

0.486

AJ

0.509

0.624

Bibs02

-0.037

0.148

Bibs02c

0.23

0.374

BL6

-0.222

0.278

BL6a

-0.011

-0.053

BXD01

-0.413

-0.387

BXD010

-0.272

-0.353

BXD011

0.209

-0.149

BXD03

0.459

-0.036

BXD04

-0.215

-0.124

BXD05

0.248

0.102

BXD06

-0.131

-0.164

BXD07

-0.27

-0.154

BXD08

-0.292

0.055

BXD09

0.029

-0.341

CAST

0.272

0.454

CCcont

-0.516

-0.201

DS01

0.087

0.756

DS02

0.153

0.548

DS04

0.333

1.15

DS0c

0.467

0.492

GP01

0.36

0.365

GP02

0.4

0.819

GP0c

0.223

0.238

NOD

-0.285

0.5

NZO

0.178

0.426

PWK

0.728

0.253

H37Rv_KO_CtpC

0.028

-0.331

H37Rv_KO_CtpD

0.961

0.762

H37Rv_KO_Rv1272

0.155

-0.371

H37Rv_KO_SugABC

0.873

0.753

H37Rv_KO_MbtN

0.055

-0.022

Trans05

0.116

0.034

macrophage_unactivated

-0.243

-0.603

IL1

-0.303

0.314

Rapamycin

-0.5

-0.193

Tcell

-0.531

-0.622

GMCSF

0.042

0.211

IFNab

-0.109

0.042

IFNg

-0.388

-0.305

IFNg_GMCSF1

0.17

0.022

Rv1432_day32

-0.33

-0.242

Rv1565c_day32

0.34

0.27

secA2_input

-0.149

0.969

delta_Rv3594

-0.006

0.754

delta_Rv3717

0.118

0.673

delta_Rv3811

-0.031

0.344

delta_Rv0954

-0.119

0.098

PonA1

0.367

0.188

EccD1_KO

-0.293

0.437

EspI_KO

-0.405

-0.094

PE35_KO

-0.108

-0.324

PPE68_KO

-0.685

-0.47

glycerol2

0.205

0.154

lignocerate

0.101

0.639

oleate

0.366

0.237

phosphatidylcholine

0.22

0.282

acetate

-0.191

0.387

glucAc

-0.026

0.468

Rv0950ko

1.019

0.386

Rv1096ko

0.464

1.276

Rv3684ko

0.802

0.108

delta_otsA_trehalose

-1.296

-0.912