Top 10 genes with highest correlation to Rv3487c/lipF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3425/PPE57 | (cc=0.5702) | info on Rv3425/PPE57 |
| Rv0072/- | (cc=0.5657) | info on Rv0072/- |
| Rv3840/- | (cc=0.552) | info on Rv3840/- |
| Rv2443/dctA | (cc=0.5494) | info on Rv2443/dctA |
| Rv1386/PE15 | (cc=0.5433) | info on Rv1386/PE15 |
| Rv3784/- | (cc=0.5374) | info on Rv3784/- |
| Rv1509/- | (cc=0.5351) | info on Rv1509/- |
| Rv1831/- | (cc=0.5211) | info on Rv1831/- |
| Rv1787/PPE25 | (cc=0.5186) | info on Rv1787/PPE25 |
| Rv2430c/PPE41 | (cc=0.5167) | info on Rv2430c/PPE41 |
Correlation of Rv3487c/lipF with Rv1386/PE15
Normalized LFCs for Rv3487c/lipF:
(description and provenance of datasets)
| Rv3487c/lipF | Rv1386/PE15 | |
| Fe_supp_jason_reseq | -0.019 | -1.362 |
| low_pH_jason_reseq | -1.251 | -0.843 |
| NO_jason_reseq | -0.239 | -1.089 |
| B6_jason_reseq | -0.625 | 0.498 |
| MHCII_jason_reseq | -0.39 | -1.556 |
| Isoniazid02 | 0.253 | -0.748 |
| Rifampicin4 | 0.084 | 0.68 |
| Ethambutol3 | 0.445 | -0.547 |
| Meropenem3 | -0.216 | 0.139 |
| Vancomycin16 | -0.151 | -0.395 |
| Rv2680_day32 | -0.366 | 0.313 |
| H37Rv_KO_MarP | 0.374 | -2.023 |
| hypoxia_3wks | 0.072 | 1.332 |
| hypoxia_6wks | 0.58 | 2.063 |
| glycerol | -0.127 | -1.135 |
| cholesterol | -0.321 | -0.999 |
| AJ | 0.242 | -0.617 |
| Bibs02 | 0.181 | 0.082 |
| Bibs02c | -0.299 | -1.864 |
| BL6 | 0.189 | -0.727 |
| BL6a | 0.083 | 0.317 |
| BXD01 | 0.158 | 1.356 |
| BXD010 | 0.391 | 1.237 |
| BXD011 | 0.364 | 1.489 |
| BXD03 | 0.223 | 0.745 |
| BXD04 | 0.761 | 1.303 |
| BXD05 | 0.801 | 1.892 |
| BXD06 | 0.025 | 1.912 |
| BXD07 | 0.311 | 0.627 |
| BXD08 | 0.615 | 1.767 |
| BXD09 | 0.034 | 1.311 |
| CAST | 0.457 | 1.997 |
| CCcont | 0.187 | -0.812 |
| DS01 | 0.031 | -2.031 |
| DS02 | -0.447 | -1.739 |
| DS04 | 0.777 | 0.107 |
| DS0c | -0.676 | -1.673 |
| GP01 | 0.17 | 1.877 |
| GP02 | 1.009 | 1.883 |
| GP0c | -0.039 | 1.156 |
| NOD | 0.703 | 1.508 |
| NZO | -0.143 | -1.295 |
| PWK | 0.595 | 0.114 |
| H37Rv_KO_CtpC | 0.674 | 2.071 |
| H37Rv_KO_CtpD | 0.353 | 1.777 |
| H37Rv_KO_Rv1272 | 0.153 | 0.542 |
| H37Rv_KO_SugABC | 0.648 | 1.424 |
| H37Rv_KO_MbtN | 0.375 | 0.502 |
| Trans05 | 0.556 | 0.483 |
| macrophage_unactivated | 0.256 | -0.669 |
| IL1 | -0.059 | -1.735 |
| Rapamycin | -0.031 | -1.998 |
| Tcell | 0.042 | 0.723 |
| GMCSF | -0.209 | -0.412 |
| IFNab | -0.082 | -0.886 |
| IFNg | 0.462 | 0.192 |
| IFNg_GMCSF1 | 0.163 | 0.226 |
| Rv1432_day32 | 0.808 | 0.984 |
| Rv1565c_day32 | 0.419 | -1.099 |
| secA2_input | 0.122 | -2.109 |
| delta_Rv3594 | -0.378 | -0.817 |
| delta_Rv3717 | -0.602 | 0.999 |
| delta_Rv3811 | -0.47 | -0.596 |
| delta_Rv0954 | -0.77 | -1.097 |
| PonA1 | -0.34 | -1.627 |
| EccD1_KO | -0.118 | -0.898 |
| EspI_KO | -0.262 | -1.862 |
| PE35_KO | -1.105 | -1.502 |
| PPE68_KO | -0.752 | -1.565 |
| glycerol2 | 0.604 | -0.028 |
| lignocerate | 0.57 | -0.177 |
| oleate | 0.693 | -0.13 |
| phosphatidylcholine | 0.787 | 0.259 |
| acetate | -0.274 | -0.825 |
| glucAc | 0.247 | -0.649 |
| Rv0950ko | 0.374 | -0.314 |
| Rv1096ko | -0.543 | -0.775 |
| Rv3684ko | -1.123 | -0.858 |
| delta_otsA_trehalose | -0.799 | -1.238 |