Top 10 genes with highest correlation to Rv3475/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2649/- | (cc=0.9737) | info on Rv2649/- |
Rv3185/- | (cc=0.9674) | info on Rv3185/- |
Rv1369c/- | (cc=0.9666) | info on Rv1369c/- |
Rv3326/- | (cc=0.9661) | info on Rv3326/- |
Rv1764/- | (cc=0.9637) | info on Rv1764/- |
Rv1756c/- | (cc=0.963) | info on Rv1756c/- |
Rv2814c/- | (cc=0.9629) | info on Rv2814c/- |
Rv2167c/- | (cc=0.9561) | info on Rv2167c/- |
Rv0796/- | (cc=0.9558) | info on Rv0796/- |
Rv2279/- | (cc=0.955) | info on Rv2279/- |
Correlation of Rv3475/- with Rv0796/-
Normalized LFCs for Rv3475/-:
(description and provenance of datasets)
Rv3475/- | Rv0796/- | |
Fe_supp_jason_reseq | -0.456 | -0.455 |
low_pH_jason_reseq | -0.413 | -0.366 |
NO_jason_reseq | 0.179 | 0.207 |
B6_jason_reseq | -0.671 | -0.312 |
MHCII_jason_reseq | -0.15 | 0.066 |
Isoniazid02 | 0.0 | -0.063 |
Rifampicin4 | 0.942 | 0.977 |
Ethambutol3 | 0.591 | 0.428 |
Meropenem3 | -0.201 | -0.361 |
Vancomycin16 | 0.117 | -0.048 |
Rv2680_day32 | 0.249 | 0.211 |
H37Rv_KO_MarP | -0.253 | -0.205 |
hypoxia_3wks | 0.439 | 0.714 |
hypoxia_6wks | 0.161 | 0.267 |
glycerol | -0.549 | -0.878 |
cholesterol | 0.198 | 0.007 |
AJ | 1.348 | 1.259 |
Bibs02 | 1.098 | 1.07 |
Bibs02c | 1.491 | 1.676 |
BL6 | 0.014 | 0.132 |
BL6a | 0.897 | 1.017 |
BXD01 | 0.73 | 0.599 |
BXD010 | 0.761 | 0.851 |
BXD011 | 0.827 | 0.846 |
BXD03 | 0.847 | 0.668 |
BXD04 | 0.477 | 0.374 |
BXD05 | 1.002 | 0.95 |
BXD06 | 0.547 | 0.53 |
BXD07 | 0.881 | 0.738 |
BXD08 | 0.53 | 0.58 |
BXD09 | 0.673 | 0.749 |
CAST | 1.17 | 1.213 |
CCcont | -0.026 | 0.024 |
DS01 | 0.922 | 1.08 |
DS02 | 0.934 | 0.941 |
DS04 | 1.107 | 1.119 |
DS0c | 1.039 | 1.263 |
GP01 | 1.169 | 1.275 |
GP02 | 1.477 | 1.231 |
GP0c | 0.835 | 0.611 |
NOD | 1.334 | 1.383 |
NZO | 1.006 | 0.877 |
PWK | 1.216 | 1.178 |
H37Rv_KO_CtpC | 0.741 | 0.608 |
H37Rv_KO_CtpD | 0.814 | 0.761 |
H37Rv_KO_Rv1272 | 0.492 | 0.357 |
H37Rv_KO_SugABC | 0.875 | 0.887 |
H37Rv_KO_MbtN | 0.553 | 0.523 |
Trans05 | 0.771 | 0.671 |
macrophage_unactivated | -0.95 | -0.644 |
IL1 | -0.217 | -0.4 |
Rapamycin | -0.638 | -0.583 |
Tcell | -0.981 | -0.877 |
GMCSF | -0.103 | -0.251 |
IFNab | -0.674 | -0.928 |
IFNg | -0.42 | -0.273 |
IFNg_GMCSF1 | -0.295 | -0.217 |
Rv1432_day32 | 0.837 | 0.317 |
Rv1565c_day32 | 0.167 | 0.415 |
secA2_input | 0.072 | -0.042 |
delta_Rv3594 | -0.066 | 0.057 |
delta_Rv3717 | -0.109 | -0.122 |
delta_Rv3811 | -0.156 | -0.028 |
delta_Rv0954 | 0.41 | 0.895 |
PonA1 | 0.122 | 0.223 |
EccD1_KO | 0.155 | 0.0 |
EspI_KO | 1.184 | 0.781 |
PE35_KO | 1.05 | 0.779 |
PPE68_KO | 0.819 | 0.365 |
glycerol2 | -0.771 | -0.886 |
lignocerate | -0.728 | -0.547 |
oleate | -0.767 | -0.839 |
phosphatidylcholine | -0.718 | -0.706 |
acetate | 0.0 | 0.201 |
glucAc | -0.168 | 0.106 |
Rv0950ko | -0.178 | 0.109 |
Rv1096ko | 0.057 | 0.021 |
Rv3684ko | -0.783 | -0.17 |
delta_otsA_trehalose | 0.549 | 0.482 |