Top 10 genes with highest correlation to Rv3358/relK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2636/- | (cc=0.5045) | info on Rv2636/- |
| Rv1351/- | (cc=0.4919) | info on Rv1351/- |
| Rv1453/- | (cc=0.4701) | info on Rv1453/- |
| Rv3612c/- | (cc=0.4661) | info on Rv3612c/- |
| Rv2478c/- | (cc=0.4655) | info on Rv2478c/- |
| Rv2725c/hflX | (cc=0.4552) | info on Rv2725c/hflX |
| Rv0840c/pip | (cc=0.4529) | info on Rv0840c/pip |
| Rv2329c/narK1 | (cc=0.4526) | info on Rv2329c/narK1 |
| Rv1614/lgt | (cc=0.4465) | info on Rv1614/lgt |
| Rv1182/papA3 | (cc=0.4432) | info on Rv1182/papA3 |
Correlation of Rv3358/relK with Rv2636/-
Normalized LFCs for Rv3358/relK:
(description and provenance of datasets)
| Rv3358/relK | Rv2636/- | |
| Fe_supp_jason_reseq | 0.71 | -0.073 |
| low_pH_jason_reseq | -1.066 | -0.942 |
| NO_jason_reseq | -0.543 | 0.071 |
| B6_jason_reseq | 1.006 | 1.243 |
| MHCII_jason_reseq | 0.971 | 1.783 |
| Isoniazid02 | 0.371 | -0.55 |
| Rifampicin4 | 0.948 | 0.162 |
| Ethambutol3 | 0.574 | 0.417 |
| Meropenem3 | 0.041 | -1.06 |
| Vancomycin16 | 0.464 | -0.642 |
| Rv2680_day32 | 1.056 | 1.092 |
| H37Rv_KO_MarP | 0.193 | 0.013 |
| hypoxia_3wks | -0.351 | 0.056 |
| hypoxia_6wks | -0.401 | -0.186 |
| glycerol | 0.247 | 0.263 |
| cholesterol | 0.006 | 0.048 |
| AJ | 0.267 | 0.345 |
| Bibs02 | 1.298 | 0.177 |
| Bibs02c | 1.434 | 0.358 |
| BL6 | -0.094 | -0.987 |
| BL6a | 0.948 | -0.442 |
| BXD01 | -0.248 | -1.222 |
| BXD010 | 0.22 | -0.989 |
| BXD011 | -1.609 | -1.507 |
| BXD03 | -0.389 | -1.037 |
| BXD04 | -0.866 | -1.588 |
| BXD05 | -1.065 | -0.968 |
| BXD06 | -0.873 | -1.495 |
| BXD07 | -0.257 | -1.077 |
| BXD08 | -1.111 | -0.781 |
| BXD09 | -0.562 | -1.87 |
| CAST | -0.674 | 0.174 |
| CCcont | -0.868 | -1.767 |
| DS01 | 0.202 | 0.399 |
| DS02 | -1.158 | 0.578 |
| DS04 | -0.215 | -0.409 |
| DS0c | -0.35 | 0.083 |
| GP01 | -1.576 | -0.456 |
| GP02 | 0.42 | -0.744 |
| GP0c | -3.067 | -0.677 |
| NOD | 2.088 | 0.574 |
| NZO | -0.48 | 0.126 |
| PWK | -0.929 | -0.057 |
| H37Rv_KO_CtpC | -0.679 | -1.77 |
| H37Rv_KO_CtpD | -1.19 | -0.581 |
| H37Rv_KO_Rv1272 | -1.257 | -1.089 |
| H37Rv_KO_SugABC | -2.227 | -1.719 |
| H37Rv_KO_MbtN | -0.191 | -0.848 |
| Trans05 | -1.582 | -0.088 |
| macrophage_unactivated | -0.65 | -0.653 |
| IL1 | -1.258 | -0.445 |
| Rapamycin | -1.409 | -0.546 |
| Tcell | -0.114 | -0.867 |
| GMCSF | -0.652 | -0.446 |
| IFNab | -0.33 | -1.155 |
| IFNg | -0.42 | -0.136 |
| IFNg_GMCSF1 | -0.028 | -0.079 |
| Rv1432_day32 | -0.961 | -0.16 |
| Rv1565c_day32 | 0.182 | 0.062 |
| secA2_input | 0.133 | 1.133 |
| delta_Rv3594 | -0.352 | -0.601 |
| delta_Rv3717 | -0.356 | -0.271 |
| delta_Rv3811 | -0.504 | -0.458 |
| delta_Rv0954 | -1.426 | 0.151 |
| PonA1 | 0.316 | -0.324 |
| EccD1_KO | -0.266 | -0.151 |
| EspI_KO | 0.428 | 0.271 |
| PE35_KO | -0.271 | -0.079 |
| PPE68_KO | 0.141 | -0.266 |
| glycerol2 | -0.311 | 0.534 |
| lignocerate | 0.315 | 0.498 |
| oleate | 0.084 | 0.303 |
| phosphatidylcholine | 0.489 | 0.709 |
| acetate | 0.258 | 0.156 |
| glucAc | 0.16 | 0.155 |
| Rv0950ko | -1.212 | -0.027 |
| Rv1096ko | -0.615 | -0.25 |
| Rv3684ko | -2.027 | -0.662 |
| delta_otsA_trehalose | 0.135 | 0.719 |