Top 10 genes with highest correlation to Rv3331/sugI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0336/- | (cc=0.5126) | info on Rv0336/- |
| Rv0515/- | (cc=0.4943) | info on Rv0515/- |
| Rv2867c/- | (cc=0.4643) | info on Rv2867c/- |
| Rv2880c/- | (cc=0.4566) | info on Rv2880c/- |
| Rv3697c/vapC48 | (cc=0.4562) | info on Rv3697c/vapC48 |
| Rv1439c/- | (cc=0.451) | info on Rv1439c/- |
| Rv2665/- | (cc=0.4362) | info on Rv2665/- |
| Rv2118c/- | (cc=0.425) | info on Rv2118c/- |
| Rv3474/- | (cc=0.4241) | info on Rv3474/- |
| Rv0775/- | (cc=0.4231) | info on Rv0775/- |
Correlation of Rv3331/sugI with Rv2867c/-
Normalized LFCs for Rv3331/sugI:
(description and provenance of datasets)
| Rv3331/sugI | Rv2867c/- | |
| Fe_supp_jason_reseq | -1.05 | -0.286 |
| low_pH_jason_reseq | -0.345 | 1.094 |
| NO_jason_reseq | 3.048 | 2.919 |
| B6_jason_reseq | 0.027 | -0.311 |
| MHCII_jason_reseq | -0.221 | 1.83 |
| Isoniazid02 | 0.455 | -0.188 |
| Rifampicin4 | 1.79 | 0.712 |
| Ethambutol3 | 1.144 | -0.371 |
| Meropenem3 | 0.305 | 4.582 |
| Vancomycin16 | 1.979 | 0.759 |
| Rv2680_day32 | -0.497 | -0.52 |
| H37Rv_KO_MarP | 0.262 | 0.44 |
| hypoxia_3wks | -0.116 | -0.219 |
| hypoxia_6wks | -0.885 | -0.299 |
| glycerol | 0.424 | 1.701 |
| cholesterol | 0.389 | 1.109 |
| AJ | 0.654 | 1.257 |
| Bibs02 | -0.499 | 0.093 |
| Bibs02c | 0.781 | 0.47 |
| BL6 | 0.896 | -0.543 |
| BL6a | 0.204 | -0.218 |
| BXD01 | 0.795 | -0.629 |
| BXD010 | 0.645 | -0.265 |
| BXD011 | -0.065 | -0.533 |
| BXD03 | 0.356 | -0.058 |
| BXD04 | 0.994 | 0.48 |
| BXD05 | 0.388 | -0.975 |
| BXD06 | 0.166 | -0.086 |
| BXD07 | 0.483 | -0.646 |
| BXD08 | 0.635 | 0.582 |
| BXD09 | 0.729 | -0.852 |
| CAST | 1.542 | 2.399 |
| CCcont | 0.209 | 0.231 |
| DS01 | 1.189 | 2.024 |
| DS02 | 2.748 | 1.482 |
| DS04 | 1.211 | 1.258 |
| DS0c | 1.136 | 1.419 |
| GP01 | 0.327 | -0.895 |
| GP02 | -0.536 | 0.034 |
| GP0c | -0.369 | -1.506 |
| NOD | 0.914 | 1.494 |
| NZO | 1.394 | 1.595 |
| PWK | 1.037 | 2.066 |
| H37Rv_KO_CtpC | 0.851 | -0.758 |
| H37Rv_KO_CtpD | 1.383 | 0.327 |
| H37Rv_KO_Rv1272 | -0.147 | -0.59 |
| H37Rv_KO_SugABC | 0.524 | 1.088 |
| H37Rv_KO_MbtN | -0.799 | -0.125 |
| Trans05 | 0.134 | -0.322 |
| macrophage_unactivated | -0.669 | -1.36 |
| IL1 | -0.24 | 0.323 |
| Rapamycin | -0.792 | -0.473 |
| Tcell | -1.212 | -2.014 |
| GMCSF | 0.169 | -1.439 |
| IFNab | -0.46 | -2.694 |
| IFNg | -0.216 | -1.521 |
| IFNg_GMCSF1 | 0.041 | -0.716 |
| Rv1432_day32 | 0.331 | 1.886 |
| Rv1565c_day32 | 0.605 | 0.67 |
| secA2_input | -0.657 | -0.78 |
| delta_Rv3594 | -0.522 | -0.685 |
| delta_Rv3717 | -0.75 | -1.854 |
| delta_Rv3811 | -1.603 | -0.254 |
| delta_Rv0954 | -0.255 | -1.257 |
| PonA1 | 0.286 | -1.045 |
| EccD1_KO | -0.97 | 0.464 |
| EspI_KO | -0.593 | -0.667 |
| PE35_KO | 0.373 | 0.621 |
| PPE68_KO | -0.534 | -0.045 |
| glycerol2 | -0.503 | -2.123 |
| lignocerate | 0.094 | -0.627 |
| oleate | 0.452 | -0.414 |
| phosphatidylcholine | 1.693 | -2.323 |
| acetate | 0.652 | 1.077 |
| glucAc | 0.156 | 1.944 |
| Rv0950ko | 1.263 | 0.519 |
| Rv1096ko | 0.802 | -0.283 |
| Rv3684ko | -0.052 | -0.308 |
| delta_otsA_trehalose | -0.122 | -0.74 |