Top 10 genes with highest correlation to Rv3306c/amiB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3899c/- | (cc=0.4083) | info on Rv3899c/- |
| Rv2505c/fadD35 | (cc=0.4057) | info on Rv2505c/fadD35 |
| Rv2976c/ung | (cc=0.3972) | info on Rv2976c/ung |
| Rv2453c/mobA | (cc=0.396) | info on Rv2453c/mobA |
| Rv3585/radA | (cc=0.3943) | info on Rv3585/radA |
| Rv2658c/- | (cc=0.3934) | info on Rv2658c/- |
| Rv2029c/pfkB | (cc=0.3902) | info on Rv2029c/pfkB |
| Rv0969/ctpV | (cc=0.3854) | info on Rv0969/ctpV |
| Rv1486c/- | (cc=0.3803) | info on Rv1486c/- |
| Rv0954/- | (cc=0.3801) | info on Rv0954/- |
Correlation of Rv3306c/amiB1 with Rv2976c/ung
Normalized LFCs for Rv3306c/amiB1:
(description and provenance of datasets)
| Rv3306c/amiB1 | Rv2976c/ung | |
| Fe_supp_jason_reseq | -0.431 | -0.213 |
| low_pH_jason_reseq | -2.453 | -0.149 |
| NO_jason_reseq | -0.638 | -0.173 |
| B6_jason_reseq | -1.003 | -0.437 |
| MHCII_jason_reseq | -0.326 | 0.633 |
| Isoniazid02 | -0.33 | -0.06 |
| Rifampicin4 | 0.236 | 0.417 |
| Ethambutol3 | 2.512 | 1.3 |
| Meropenem3 | 0.036 | 0.117 |
| Vancomycin16 | -0.698 | 0.31 |
| Rv2680_day32 | -0.575 | -1.669 |
| H37Rv_KO_MarP | 0.837 | -0.47 |
| hypoxia_3wks | -1.459 | 1.603 |
| hypoxia_6wks | -0.332 | 0.48 |
| glycerol | 1.772 | 1.442 |
| cholesterol | 0.668 | -0.415 |
| AJ | 0.0 | -0.309 |
| Bibs02 | 0.775 | 0.898 |
| Bibs02c | 0.747 | 0.735 |
| BL6 | -1.366 | -1.761 |
| BL6a | 0.508 | 0.867 |
| BXD01 | 0.252 | 1.158 |
| BXD010 | -0.47 | 0.33 |
| BXD011 | -1.025 | -0.4 |
| BXD03 | 0.52 | 1.626 |
| BXD04 | -0.676 | 0.236 |
| BXD05 | 0.78 | 0.391 |
| BXD06 | -0.107 | 0.408 |
| BXD07 | -0.082 | 0.944 |
| BXD08 | -0.35 | 0.0 |
| BXD09 | -0.679 | 0.88 |
| CAST | -0.662 | 0.594 |
| CCcont | -0.633 | -0.601 |
| DS01 | 0.57 | 2.034 |
| DS02 | -0.175 | 1.793 |
| DS04 | -0.659 | 0.468 |
| DS0c | 1.486 | 1.383 |
| GP01 | -0.642 | 0.912 |
| GP02 | -0.402 | 1.42 |
| GP0c | -0.442 | 0.622 |
| NOD | -0.088 | 1.764 |
| NZO | 0.354 | -1.618 |
| PWK | -0.374 | 0.269 |
| H37Rv_KO_CtpC | -0.235 | -1.935 |
| H37Rv_KO_CtpD | -0.075 | -1.889 |
| H37Rv_KO_Rv1272 | -0.557 | -1.144 |
| H37Rv_KO_SugABC | 1.561 | 1.012 |
| H37Rv_KO_MbtN | -0.172 | 0.141 |
| Trans05 | 0.996 | -0.144 |
| macrophage_unactivated | 0.925 | 1.401 |
| IL1 | 0.78 | 0.273 |
| Rapamycin | 0.899 | 1.089 |
| Tcell | 0.117 | 1.724 |
| GMCSF | 2.688 | 1.352 |
| IFNab | -0.339 | 0.278 |
| IFNg | -0.099 | -0.329 |
| IFNg_GMCSF1 | -0.735 | -0.386 |
| Rv1432_day32 | 0.498 | 0.382 |
| Rv1565c_day32 | 0.565 | 0.0 |
| secA2_input | 0.178 | -1.246 |
| delta_Rv3594 | -0.968 | -1.455 |
| delta_Rv3717 | -0.312 | -0.629 |
| delta_Rv3811 | -0.271 | -1.938 |
| delta_Rv0954 | -1.796 | -1.606 |
| PonA1 | 0.554 | -1.07 |
| EccD1_KO | 1.138 | 2.312 |
| EspI_KO | 0.168 | 0.456 |
| PE35_KO | 0.335 | 0.957 |
| PPE68_KO | 0.873 | 0.432 |
| glycerol2 | 0.391 | -0.957 |
| lignocerate | -0.621 | -1.889 |
| oleate | -0.376 | 0.469 |
| phosphatidylcholine | -0.874 | -1.119 |
| acetate | -0.554 | -1.378 |
| glucAc | -1.045 | -2.208 |
| Rv0950ko | -1.279 | -0.519 |
| Rv1096ko | 0.522 | -1.354 |
| Rv3684ko | -1.055 | 1.172 |
| delta_otsA_trehalose | 1.026 | -0.096 |