Top 10 genes with highest correlation to Rv3306c/amiB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3899c/- | (cc=0.4083) | info on Rv3899c/- |
| Rv2505c/fadD35 | (cc=0.4057) | info on Rv2505c/fadD35 |
| Rv2976c/ung | (cc=0.3972) | info on Rv2976c/ung |
| Rv2453c/mobA | (cc=0.396) | info on Rv2453c/mobA |
| Rv3585/radA | (cc=0.3943) | info on Rv3585/radA |
| Rv2658c/- | (cc=0.3934) | info on Rv2658c/- |
| Rv2029c/pfkB | (cc=0.3902) | info on Rv2029c/pfkB |
| Rv0969/ctpV | (cc=0.3854) | info on Rv0969/ctpV |
| Rv1486c/- | (cc=0.3803) | info on Rv1486c/- |
| Rv0954/- | (cc=0.3801) | info on Rv0954/- |
Correlation of Rv3306c/amiB1 with Rv3899c/-
Normalized LFCs for Rv3306c/amiB1:
(description and provenance of datasets)
| Rv3306c/amiB1 | Rv3899c/- | |
| Fe_supp_jason_reseq | -0.431 | 0.084 |
| low_pH_jason_reseq | -2.453 | -1.057 |
| NO_jason_reseq | -0.638 | -0.79 |
| B6_jason_reseq | -1.003 | 0.297 |
| MHCII_jason_reseq | -0.326 | -0.212 |
| Isoniazid02 | -0.33 | 0.453 |
| Rifampicin4 | 0.236 | -0.022 |
| Ethambutol3 | 2.512 | 1.266 |
| Meropenem3 | 0.036 | -0.113 |
| Vancomycin16 | -0.698 | -0.021 |
| Rv2680_day32 | -0.575 | 0.219 |
| H37Rv_KO_MarP | 0.837 | 0.052 |
| hypoxia_3wks | -1.459 | -0.303 |
| hypoxia_6wks | -0.332 | -0.595 |
| glycerol | 1.772 | 0.171 |
| cholesterol | 0.668 | 0.465 |
| AJ | 0.0 | 0.319 |
| Bibs02 | 0.775 | 0.506 |
| Bibs02c | 0.747 | 0.061 |
| BL6 | -1.366 | -0.275 |
| BL6a | 0.508 | -0.314 |
| BXD01 | 0.252 | -0.162 |
| BXD010 | -0.47 | 0.492 |
| BXD011 | -1.025 | -0.191 |
| BXD03 | 0.52 | -0.25 |
| BXD04 | -0.676 | -0.084 |
| BXD05 | 0.78 | -0.168 |
| BXD06 | -0.107 | -0.05 |
| BXD07 | -0.082 | -0.052 |
| BXD08 | -0.35 | 0.019 |
| BXD09 | -0.679 | 0.119 |
| CAST | -0.662 | -0.327 |
| CCcont | -0.633 | -0.384 |
| DS01 | 0.57 | 0.279 |
| DS02 | -0.175 | 0.733 |
| DS04 | -0.659 | 0.292 |
| DS0c | 1.486 | 0.765 |
| GP01 | -0.642 | -0.312 |
| GP02 | -0.402 | 0.206 |
| GP0c | -0.442 | 0.307 |
| NOD | -0.088 | -0.189 |
| NZO | 0.354 | 0.672 |
| PWK | -0.374 | -0.198 |
| H37Rv_KO_CtpC | -0.235 | 0.727 |
| H37Rv_KO_CtpD | -0.075 | 0.314 |
| H37Rv_KO_Rv1272 | -0.557 | 1.068 |
| H37Rv_KO_SugABC | 1.561 | 0.767 |
| H37Rv_KO_MbtN | -0.172 | 0.181 |
| Trans05 | 0.996 | 0.751 |
| macrophage_unactivated | 0.925 | 0.281 |
| IL1 | 0.78 | 0.392 |
| Rapamycin | 0.899 | 0.678 |
| Tcell | 0.117 | 0.176 |
| GMCSF | 2.688 | 0.095 |
| IFNab | -0.339 | 0.644 |
| IFNg | -0.099 | -0.15 |
| IFNg_GMCSF1 | -0.735 | 1.119 |
| Rv1432_day32 | 0.498 | -0.253 |
| Rv1565c_day32 | 0.565 | 0.13 |
| secA2_input | 0.178 | 0.945 |
| delta_Rv3594 | -0.968 | -0.024 |
| delta_Rv3717 | -0.312 | 0.186 |
| delta_Rv3811 | -0.271 | 0.262 |
| delta_Rv0954 | -1.796 | 0.04 |
| PonA1 | 0.554 | 0.447 |
| EccD1_KO | 1.138 | 0.612 |
| EspI_KO | 0.168 | 0.399 |
| PE35_KO | 0.335 | 0.093 |
| PPE68_KO | 0.873 | 0.182 |
| glycerol2 | 0.391 | 0.161 |
| lignocerate | -0.621 | 0.029 |
| oleate | -0.376 | 0.576 |
| phosphatidylcholine | -0.874 | -0.017 |
| acetate | -0.554 | 0.567 |
| glucAc | -1.045 | 0.085 |
| Rv0950ko | -1.279 | 0.193 |
| Rv1096ko | 0.522 | -0.121 |
| Rv3684ko | -1.055 | 0.167 |
| delta_otsA_trehalose | 1.026 | 0.682 |