Top 10 genes with highest correlation to Rv3303c/lpdA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0526/- | (cc=0.5704) | info on Rv0526/- |
| Rv3248c/sahH | (cc=0.5372) | info on Rv3248c/sahH |
| Rv0904c/accD3 | (cc=0.4981) | info on Rv0904c/accD3 |
| Rv2347c/esxP | (cc=0.4976) | info on Rv2347c/esxP |
| Rv2169c/- | (cc=0.4678) | info on Rv2169c/- |
| Rv3455c/truA | (cc=0.4675) | info on Rv3455c/truA |
| Rv2290/lppO | (cc=0.4633) | info on Rv2290/lppO |
| Rv3193c/- | (cc=0.4572) | info on Rv3193c/- |
| Rv1098c/fum | (cc=0.4498) | info on Rv1098c/fum |
| Rv1298/rpmE | (cc=0.4496) | info on Rv1298/rpmE |
Correlation of Rv3303c/lpdA with Rv2290/lppO
Normalized LFCs for Rv3303c/lpdA:
(description and provenance of datasets)
| Rv3303c/lpdA | Rv2290/lppO | |
| Fe_supp_jason_reseq | -1.274 | 0.537 |
| low_pH_jason_reseq | 0.811 | -0.182 |
| NO_jason_reseq | 4.284 | -0.06 |
| B6_jason_reseq | 0.752 | 0.398 |
| MHCII_jason_reseq | 0.446 | 0.099 |
| Isoniazid02 | -1.493 | -0.336 |
| Rifampicin4 | -0.699 | -1.064 |
| Ethambutol3 | -1.248 | -0.545 |
| Meropenem3 | -1.229 | -0.736 |
| Vancomycin16 | -1.414 | -0.438 |
| Rv2680_day32 | 0.99 | -0.222 |
| H37Rv_KO_MarP | 0.535 | 0.792 |
| hypoxia_3wks | -1.244 | 0.0 |
| hypoxia_6wks | -0.263 | 0.167 |
| glycerol | 1.24 | -0.012 |
| cholesterol | 0.325 | -0.244 |
| AJ | -0.049 | 0.027 |
| Bibs02 | 0.25 | 0.813 |
| Bibs02c | -0.433 | 0.129 |
| BL6 | -0.393 | 0.556 |
| BL6a | 0.121 | 0.288 |
| BXD01 | -0.409 | -0.892 |
| BXD010 | -0.516 | 0.448 |
| BXD011 | -0.513 | 0.75 |
| BXD03 | 0.573 | 0.257 |
| BXD04 | 0.655 | 0.135 |
| BXD05 | -0.766 | 0.658 |
| BXD06 | 0.107 | 0.075 |
| BXD07 | -0.475 | 0.07 |
| BXD08 | 0.055 | 0.008 |
| BXD09 | -0.702 | 0.358 |
| CAST | 0.0 | -0.312 |
| CCcont | -0.096 | -0.026 |
| DS01 | -0.881 | 0.014 |
| DS02 | -0.624 | -0.309 |
| DS04 | -1.036 | 0.011 |
| DS0c | 0.487 | -0.366 |
| GP01 | 0.021 | 0.26 |
| GP02 | -1.047 | 0.0 |
| GP0c | -0.65 | -0.57 |
| NOD | 0.308 | 0.592 |
| NZO | 0.042 | -0.107 |
| PWK | 1.272 | -0.117 |
| H37Rv_KO_CtpC | -0.925 | 0.228 |
| H37Rv_KO_CtpD | -0.473 | -0.867 |
| H37Rv_KO_Rv1272 | -1.279 | -0.421 |
| H37Rv_KO_SugABC | -0.086 | 0.271 |
| H37Rv_KO_MbtN | -0.354 | 0.253 |
| Trans05 | -0.947 | -0.331 |
| macrophage_unactivated | -0.524 | -0.123 |
| IL1 | 0.525 | -0.442 |
| Rapamycin | 0.457 | -0.264 |
| Tcell | 0.199 | -0.652 |
| GMCSF | -0.438 | 0.214 |
| IFNab | 0.363 | -0.408 |
| IFNg | -0.35 | 0.102 |
| IFNg_GMCSF1 | -1.647 | 1.59 |
| Rv1432_day32 | 0.82 | 0.332 |
| Rv1565c_day32 | -1.02 | 0.302 |
| secA2_input | -0.332 | -0.935 |
| delta_Rv3594 | 0.958 | 1.213 |
| delta_Rv3717 | 0.648 | 0.339 |
| delta_Rv3811 | -0.479 | 0.663 |
| delta_Rv0954 | 0.426 | -0.09 |
| PonA1 | 2.434 | 0.436 |
| EccD1_KO | 0.888 | 0.556 |
| EspI_KO | 0.12 | 0.311 |
| PE35_KO | 0.788 | 1.0 |
| PPE68_KO | 1.779 | 0.621 |
| glycerol2 | -1.002 | -1.833 |
| lignocerate | -2.549 | -2.314 |
| oleate | -3.603 | -1.733 |
| phosphatidylcholine | -2.801 | -2.438 |
| acetate | -2.562 | -3.262 |
| glucAc | -1.463 | -1.611 |
| Rv0950ko | 1.396 | 0.537 |
| Rv1096ko | 1.879 | -0.588 |
| Rv3684ko | 1.326 | -0.743 |
| delta_otsA_trehalose | 0.0 | -0.472 |