Top 10 genes with highest correlation to Rv3291c/lrpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0399c/lpqK | (cc=0.6164) | info on Rv0399c/lpqK |
| Rv0940c/- | (cc=0.556) | info on Rv0940c/- |
| Rv2791c/- | (cc=0.5523) | info on Rv2791c/- |
| Rv0925c/- | (cc=0.536) | info on Rv0925c/- |
| Rv3397c/phyA | (cc=0.5359) | info on Rv3397c/phyA |
| Rv1498c/- | (cc=0.518) | info on Rv1498c/- |
| Rv0370c/- | (cc=0.5162) | info on Rv0370c/- |
| Rv0932c/pstS2 | (cc=0.5111) | info on Rv0932c/pstS2 |
| Rv0831c/- | (cc=0.5077) | info on Rv0831c/- |
| Rv2336/- | (cc=0.5033) | info on Rv2336/- |
Correlation of Rv3291c/lrpA with Rv0940c/-
Normalized LFCs for Rv3291c/lrpA:
(description and provenance of datasets)
| Rv3291c/lrpA | Rv0940c/- | |
| Fe_supp_jason_reseq | -0.578 | -0.546 |
| low_pH_jason_reseq | 2.029 | -0.445 |
| NO_jason_reseq | -0.601 | 0.126 |
| B6_jason_reseq | -0.222 | -0.989 |
| MHCII_jason_reseq | -0.252 | -0.421 |
| Isoniazid02 | -2.93 | -4.434 |
| Rifampicin4 | 0.349 | 0.482 |
| Ethambutol3 | -2.265 | -3.779 |
| Meropenem3 | -2.83 | -4.315 |
| Vancomycin16 | -0.844 | -1.417 |
| Rv2680_day32 | -1.684 | 0.113 |
| H37Rv_KO_MarP | -0.327 | -0.255 |
| hypoxia_3wks | 0.0 | -0.841 |
| hypoxia_6wks | 1.186 | 0.754 |
| glycerol | -1.232 | 0.316 |
| cholesterol | -0.36 | 0.168 |
| AJ | -0.145 | 0.57 |
| Bibs02 | 0.54 | -1.015 |
| Bibs02c | 0.2 | -0.311 |
| BL6 | 0.98 | 0.847 |
| BL6a | 0.702 | 0.284 |
| BXD01 | 0.461 | 0.715 |
| BXD010 | 1.512 | 1.34 |
| BXD011 | 1.021 | 0.711 |
| BXD03 | 0.626 | 0.332 |
| BXD04 | 0.752 | 1.328 |
| BXD05 | 0.863 | 0.263 |
| BXD06 | 0.967 | 1.327 |
| BXD07 | 0.641 | 1.065 |
| BXD08 | 0.509 | 0.743 |
| BXD09 | 0.789 | 0.917 |
| CAST | 0.344 | 0.754 |
| CCcont | 0.058 | 1.0 |
| DS01 | -0.412 | 0.719 |
| DS02 | -0.044 | 0.736 |
| DS04 | 0.687 | 1.234 |
| DS0c | 0.324 | -0.102 |
| GP01 | -0.756 | 0.312 |
| GP02 | -0.972 | -0.803 |
| GP0c | -0.29 | -0.446 |
| NOD | -0.14 | 0.469 |
| NZO | -0.211 | 1.52 |
| PWK | 0.152 | 0.254 |
| H37Rv_KO_CtpC | -0.067 | 0.585 |
| H37Rv_KO_CtpD | 1.14 | 0.147 |
| H37Rv_KO_Rv1272 | 0.52 | 1.095 |
| H37Rv_KO_SugABC | 2.654 | 0.088 |
| H37Rv_KO_MbtN | 1.817 | 0.528 |
| Trans05 | 0.406 | 0.895 |
| macrophage_unactivated | -0.271 | -0.082 |
| IL1 | -0.525 | -0.317 |
| Rapamycin | -0.543 | -0.16 |
| Tcell | -0.837 | 0.205 |
| GMCSF | -0.858 | -0.137 |
| IFNab | -0.68 | -1.868 |
| IFNg | -0.823 | -1.446 |
| IFNg_GMCSF1 | -0.223 | -1.197 |
| Rv1432_day32 | -0.239 | 1.249 |
| Rv1565c_day32 | 0.251 | 0.692 |
| secA2_input | 0.421 | -0.863 |
| delta_Rv3594 | -0.746 | -0.571 |
| delta_Rv3717 | -1.711 | -0.691 |
| delta_Rv3811 | -0.815 | -0.663 |
| delta_Rv0954 | 0.171 | -1.222 |
| PonA1 | -0.167 | -1.092 |
| EccD1_KO | 0.793 | 0.089 |
| EspI_KO | 0.662 | 1.087 |
| PE35_KO | 1.304 | 0.522 |
| PPE68_KO | 0.71 | 0.65 |
| glycerol2 | -0.911 | 1.375 |
| lignocerate | -0.161 | 2.046 |
| oleate | 0.308 | -0.469 |
| phosphatidylcholine | -0.328 | 1.426 |
| acetate | 0.487 | 1.812 |
| glucAc | -0.614 | 1.613 |
| Rv0950ko | 0.633 | -0.482 |
| Rv1096ko | 1.236 | -0.115 |
| Rv3684ko | 0.809 | -0.524 |
| delta_otsA_trehalose | 0.274 | 0.254 |