Top 10 genes with highest correlation to Rv3286c/sigF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1690/lprJ | (cc=0.4691) | info on Rv1690/lprJ |
| Rv3375/amiD | (cc=0.428) | info on Rv3375/amiD |
| Rv1442/bisC | (cc=0.3905) | info on Rv1442/bisC |
| Rv0483/lprQ | (cc=0.3894) | info on Rv0483/lprQ |
| Rv0022c/whiB5 | (cc=0.3849) | info on Rv0022c/whiB5 |
| Rv3651/- | (cc=0.3788) | info on Rv3651/- |
| Rv2924c/fpg | (cc=0.3677) | info on Rv2924c/fpg |
| Rv3032A/- | (cc=0.3559) | info on Rv3032A/- |
| Rv0265c/- | (cc=0.3533) | info on Rv0265c/- |
| Rv3612c/- | (cc=0.3519) | info on Rv3612c/- |
Correlation of Rv3286c/sigF with Rv1690/lprJ
Normalized LFCs for Rv3286c/sigF:
(description and provenance of datasets)
| Rv3286c/sigF | Rv1690/lprJ | |
| Fe_supp_jason_reseq | -0.264 | -0.508 |
| low_pH_jason_reseq | -0.136 | 0.925 |
| NO_jason_reseq | -0.559 | -0.953 |
| B6_jason_reseq | -0.262 | -0.403 |
| MHCII_jason_reseq | 0.386 | 0.452 |
| Isoniazid02 | -0.221 | -1.132 |
| Rifampicin4 | -0.284 | 1.042 |
| Ethambutol3 | -0.996 | -1.121 |
| Meropenem3 | 1.045 | -0.151 |
| Vancomycin16 | -1.13 | -0.451 |
| Rv2680_day32 | 0.936 | -0.476 |
| H37Rv_KO_MarP | 0.786 | -0.717 |
| hypoxia_3wks | 0.088 | -0.275 |
| hypoxia_6wks | -1.042 | -2.088 |
| glycerol | 0.531 | 0.663 |
| cholesterol | -0.282 | 0.726 |
| AJ | 0.066 | -1.177 |
| Bibs02 | -0.42 | -1.827 |
| Bibs02c | -0.235 | 1.303 |
| BL6 | 0.516 | -0.195 |
| BL6a | -0.336 | 0.871 |
| BXD01 | -0.221 | -0.132 |
| BXD010 | -0.749 | 0.776 |
| BXD011 | -0.639 | -0.581 |
| BXD03 | -0.774 | -1.408 |
| BXD04 | -0.219 | -0.504 |
| BXD05 | -0.754 | -1.886 |
| BXD06 | -0.747 | -0.643 |
| BXD07 | -0.809 | -0.598 |
| BXD08 | -0.181 | 0.143 |
| BXD09 | -1.154 | -0.713 |
| CAST | -1.318 | -1.942 |
| CCcont | 0.171 | 0.559 |
| DS01 | -0.017 | 0.075 |
| DS02 | 0.192 | -0.786 |
| DS04 | -1.209 | -1.781 |
| DS0c | 0.192 | -1.045 |
| GP01 | 0.021 | 0.031 |
| GP02 | -0.276 | 0.881 |
| GP0c | -0.537 | 0.365 |
| NOD | -0.343 | 0.072 |
| NZO | 0.042 | 0.535 |
| PWK | -0.749 | -1.878 |
| H37Rv_KO_CtpC | -0.095 | -0.314 |
| H37Rv_KO_CtpD | 0.834 | 0.53 |
| H37Rv_KO_Rv1272 | -2.498 | -0.831 |
| H37Rv_KO_SugABC | -0.111 | 0.371 |
| H37Rv_KO_MbtN | -0.642 | 0.362 |
| Trans05 | -2.533 | -1.832 |
| macrophage_unactivated | 1.259 | 0.735 |
| IL1 | 0.184 | -1.092 |
| Rapamycin | -0.856 | -1.129 |
| Tcell | -0.375 | 1.14 |
| GMCSF | -1.053 | -1.497 |
| IFNab | -0.729 | -2.05 |
| IFNg | -0.401 | -1.376 |
| IFNg_GMCSF1 | 0.647 | 0.327 |
| Rv1432_day32 | -0.02 | -0.056 |
| Rv1565c_day32 | 0.333 | 1.714 |
| secA2_input | -0.391 | 0.513 |
| delta_Rv3594 | 0.191 | 0.346 |
| delta_Rv3717 | 0.434 | -0.195 |
| delta_Rv3811 | 0.018 | 0.457 |
| delta_Rv0954 | -0.447 | 0.123 |
| PonA1 | -0.621 | 0.666 |
| EccD1_KO | -1.394 | 0.428 |
| EspI_KO | -0.211 | 1.991 |
| PE35_KO | -0.528 | 0.986 |
| PPE68_KO | -0.419 | 1.664 |
| glycerol2 | 0.196 | 0.797 |
| lignocerate | -0.099 | 0.413 |
| oleate | -0.057 | 0.108 |
| phosphatidylcholine | 0.497 | 0.353 |
| acetate | -0.61 | 0.096 |
| glucAc | -0.284 | -0.149 |
| Rv0950ko | -0.235 | 1.086 |
| Rv1096ko | 0.039 | 1.616 |
| Rv3684ko | -0.124 | 0.927 |
| delta_otsA_trehalose | 1.405 | 3.883 |