Top 10 genes with highest correlation to Rv3231c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3767c/- | (cc=0.4502) | info on Rv3767c/- |
| Rv3033/- | (cc=0.4488) | info on Rv3033/- |
| Rv2127/ansP1 | (cc=0.4317) | info on Rv2127/ansP1 |
| Rv2389c/rpfD | (cc=0.4294) | info on Rv2389c/rpfD |
| Rv2113/- | (cc=0.4104) | info on Rv2113/- |
| Rv1875/- | (cc=0.4025) | info on Rv1875/- |
| Rv0251c/hsp | (cc=0.3941) | info on Rv0251c/hsp |
| Rv3685c/cyp137 | (cc=0.3894) | info on Rv3685c/cyp137 |
| Rv2129c/- | (cc=0.3867) | info on Rv2129c/- |
| Rv3390/lpqD | (cc=0.3861) | info on Rv3390/lpqD |
Correlation of Rv3231c/- with Rv2127/ansP1
Normalized LFCs for Rv3231c/-:
(description and provenance of datasets)
| Rv3231c/- | Rv2127/ansP1 | |
| Fe_supp_jason_reseq | -0.062 | -0.684 |
| low_pH_jason_reseq | -1.261 | -1.111 |
| NO_jason_reseq | -1.347 | -3.232 |
| B6_jason_reseq | -0.766 | -1.886 |
| MHCII_jason_reseq | -0.773 | -1.539 |
| Isoniazid02 | 0.153 | 0.116 |
| Rifampicin4 | -0.016 | 0.0 |
| Ethambutol3 | 0.229 | 1.294 |
| Meropenem3 | 0.948 | 0.472 |
| Vancomycin16 | 0.22 | 0.037 |
| Rv2680_day32 | 0.878 | 0.387 |
| H37Rv_KO_MarP | 0.121 | 0.054 |
| hypoxia_3wks | 0.0 | -1.264 |
| hypoxia_6wks | -1.213 | -0.472 |
| glycerol | -0.5 | -2.667 |
| cholesterol | -0.921 | -1.656 |
| AJ | -0.16 | -1.235 |
| Bibs02 | 0.698 | -0.494 |
| Bibs02c | -0.45 | -0.5 |
| BL6 | 0.271 | -1.027 |
| BL6a | -0.415 | -0.794 |
| BXD01 | -0.374 | -1.055 |
| BXD010 | -0.523 | -0.676 |
| BXD011 | 0.664 | -0.602 |
| BXD03 | 0.438 | -0.512 |
| BXD04 | 1.026 | -0.421 |
| BXD05 | 0.125 | -0.614 |
| BXD06 | 0.186 | -0.856 |
| BXD07 | -0.198 | -1.175 |
| BXD08 | 0.316 | -1.269 |
| BXD09 | 0.137 | -1.123 |
| CAST | -0.072 | -0.848 |
| CCcont | -0.727 | -0.801 |
| DS01 | -0.775 | -0.82 |
| DS02 | 0.109 | -1.364 |
| DS04 | 0.606 | 0.052 |
| DS0c | 0.201 | -1.032 |
| GP01 | -1.246 | -0.451 |
| GP02 | -1.696 | -0.564 |
| GP0c | -0.365 | -0.209 |
| NOD | -1.022 | -0.607 |
| NZO | -1.072 | -0.799 |
| PWK | -0.644 | 0.182 |
| H37Rv_KO_CtpC | 0.857 | 0.048 |
| H37Rv_KO_CtpD | 0.419 | -0.603 |
| H37Rv_KO_Rv1272 | 1.227 | 0.072 |
| H37Rv_KO_SugABC | 0.385 | 0.269 |
| H37Rv_KO_MbtN | -0.608 | -0.154 |
| Trans05 | 0.957 | -0.091 |
| macrophage_unactivated | 1.351 | -0.18 |
| IL1 | 0.801 | 0.644 |
| Rapamycin | 1.096 | 0.242 |
| Tcell | -0.71 | -0.065 |
| GMCSF | 1.143 | 0.56 |
| IFNab | 0.732 | -0.045 |
| IFNg | 0.615 | -0.371 |
| IFNg_GMCSF1 | 0.248 | -0.314 |
| Rv1432_day32 | 2.394 | 0.402 |
| Rv1565c_day32 | 0.723 | -0.398 |
| secA2_input | 0.828 | -0.684 |
| delta_Rv3594 | 1.06 | -0.301 |
| delta_Rv3717 | -0.286 | 0.052 |
| delta_Rv3811 | 0.729 | -0.519 |
| delta_Rv0954 | 0.213 | 0.043 |
| PonA1 | 1.182 | -0.649 |
| EccD1_KO | -0.506 | -0.451 |
| EspI_KO | 0.311 | -0.291 |
| PE35_KO | -0.493 | -0.21 |
| PPE68_KO | -0.928 | -0.573 |
| glycerol2 | 0.531 | 1.76 |
| lignocerate | -0.245 | -0.207 |
| oleate | 1.713 | 1.733 |
| phosphatidylcholine | 0.352 | -0.115 |
| acetate | -0.048 | 0.253 |
| glucAc | -1.524 | 0.0 |
| Rv0950ko | -0.452 | 0.434 |
| Rv1096ko | 0.347 | -0.799 |
| Rv3684ko | 0.265 | -0.58 |
| delta_otsA_trehalose | 2.083 | -0.662 |