Top 10 genes with highest correlation to Rv3225c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2601/speE | (cc=0.4966) | info on Rv2601/speE |
| Rv2646/- | (cc=0.491) | info on Rv2646/- |
| Rv3093c/- | (cc=0.4804) | info on Rv3093c/- |
| Rv2917/- | (cc=0.4803) | info on Rv2917/- |
| Rv2125/- | (cc=0.4799) | info on Rv2125/- |
| Rv2765/- | (cc=0.47) | info on Rv2765/- |
| Rv0597c/- | (cc=0.4647) | info on Rv0597c/- |
| Rv3401/- | (cc=0.4445) | info on Rv3401/- |
| Rv1982c/vapC36 | (cc=0.4366) | info on Rv1982c/vapC36 |
| Rv0132c/fgd2 | (cc=0.4358) | info on Rv0132c/fgd2 |
Correlation of Rv3225c/- with Rv2765/-
Normalized LFCs for Rv3225c/-:
(description and provenance of datasets)
| Rv3225c/- | Rv2765/- | |
| Fe_supp_jason_reseq | 0.046 | 0.609 |
| low_pH_jason_reseq | -0.711 | -0.587 |
| NO_jason_reseq | 0.173 | 0.704 |
| B6_jason_reseq | 0.134 | 0.821 |
| MHCII_jason_reseq | 0.415 | 0.674 |
| Isoniazid02 | 0.271 | -0.089 |
| Rifampicin4 | -0.826 | -0.734 |
| Ethambutol3 | 0.134 | -0.418 |
| Meropenem3 | 0.098 | 0.333 |
| Vancomycin16 | -0.021 | 0.053 |
| Rv2680_day32 | 0.258 | 0.591 |
| H37Rv_KO_MarP | 0.339 | -0.102 |
| hypoxia_3wks | -0.215 | 0.183 |
| hypoxia_6wks | 0.192 | 0.19 |
| glycerol | -0.392 | 0.0 |
| cholesterol | 0.057 | -0.702 |
| AJ | -0.027 | 0.753 |
| Bibs02 | 0.072 | 0.71 |
| Bibs02c | 0.461 | 0.359 |
| BL6 | 0.21 | 0.286 |
| BL6a | -0.265 | 0.08 |
| BXD01 | -0.73 | -0.589 |
| BXD010 | -0.61 | 0.035 |
| BXD011 | -0.859 | -0.509 |
| BXD03 | -0.733 | -0.64 |
| BXD04 | -0.556 | -0.559 |
| BXD05 | -0.729 | -0.289 |
| BXD06 | -0.384 | -0.534 |
| BXD07 | -0.064 | -1.013 |
| BXD08 | -0.598 | -0.659 |
| BXD09 | -0.583 | -0.059 |
| CAST | 0.038 | 0.169 |
| CCcont | -0.229 | -0.385 |
| DS01 | -0.014 | 0.731 |
| DS02 | -0.181 | 0.855 |
| DS04 | 0.87 | 1.039 |
| DS0c | 0.247 | 0.801 |
| GP01 | 1.094 | -0.041 |
| GP02 | 0.869 | 0.435 |
| GP0c | -0.038 | 0.429 |
| NOD | 1.023 | 0.0 |
| NZO | -0.241 | -0.202 |
| PWK | 0.141 | 0.303 |
| H37Rv_KO_CtpC | 0.258 | 0.191 |
| H37Rv_KO_CtpD | -0.237 | 0.613 |
| H37Rv_KO_Rv1272 | -0.481 | 0.894 |
| H37Rv_KO_SugABC | 0.623 | 0.535 |
| H37Rv_KO_MbtN | -0.118 | -0.371 |
| Trans05 | -0.254 | 0.349 |
| macrophage_unactivated | -0.167 | -0.123 |
| IL1 | -0.222 | -0.439 |
| Rapamycin | 0.338 | -0.04 |
| Tcell | -0.499 | -0.622 |
| GMCSF | 0.026 | -0.702 |
| IFNab | -0.16 | 0.336 |
| IFNg | -0.171 | -0.139 |
| IFNg_GMCSF1 | 0.286 | -0.421 |
| Rv1432_day32 | 0.102 | 0.263 |
| Rv1565c_day32 | -0.014 | -0.112 |
| secA2_input | -0.114 | 0.111 |
| delta_Rv3594 | -0.211 | 0.779 |
| delta_Rv3717 | 0.063 | 0.258 |
| delta_Rv3811 | -0.015 | 0.739 |
| delta_Rv0954 | -0.39 | 0.168 |
| PonA1 | 0.624 | 0.368 |
| EccD1_KO | 0.253 | 0.533 |
| EspI_KO | -0.482 | -0.473 |
| PE35_KO | -0.117 | 0.163 |
| PPE68_KO | -0.163 | 0.266 |
| glycerol2 | -0.856 | -0.364 |
| lignocerate | -0.358 | -0.192 |
| oleate | -0.54 | -0.622 |
| phosphatidylcholine | -0.549 | -0.319 |
| acetate | -0.929 | -0.613 |
| glucAc | -0.294 | 0.347 |
| Rv0950ko | 0.238 | -0.187 |
| Rv1096ko | 0.172 | 0.483 |
| Rv3684ko | -0.154 | -0.416 |
| delta_otsA_trehalose | -0.467 | 0.384 |