Top 10 genes with highest correlation to Rv3217c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.6087) | info on Rv3208A/TB9.4 |
| Rv2212/- | (cc=0.5643) | info on Rv2212/- |
| Rv1103c/mazE3 | (cc=0.5539) | info on Rv1103c/mazE3 |
| Rv2019/- | (cc=0.5449) | info on Rv2019/- |
| Rv2613c/- | (cc=0.539) | info on Rv2613c/- |
| Rv2960c/- | (cc=0.5323) | info on Rv2960c/- |
| Rv2219/- | (cc=0.5315) | info on Rv2219/- |
| Rv1987/- | (cc=0.5293) | info on Rv1987/- |
| Rv2237/- | (cc=0.5208) | info on Rv2237/- |
| Rv2240c/- | (cc=0.5203) | info on Rv2240c/- |
Correlation of Rv3217c/- with Rv2219/-
Normalized LFCs for Rv3217c/-:
(description and provenance of datasets)
| Rv3217c/- | Rv2219/- | |
| Fe_supp_jason_reseq | 1.552 | -0.137 |
| low_pH_jason_reseq | 0.915 | -1.282 |
| NO_jason_reseq | -0.583 | -0.228 |
| B6_jason_reseq | 3.158 | -0.097 |
| MHCII_jason_reseq | -1.442 | 0.229 |
| Isoniazid02 | -0.419 | 0.162 |
| Rifampicin4 | 0.338 | -0.682 |
| Ethambutol3 | 0.015 | -0.146 |
| Meropenem3 | 0.393 | -0.474 |
| Vancomycin16 | 0.417 | -0.669 |
| Rv2680_day32 | -2.096 | -1.75 |
| H37Rv_KO_MarP | 0.151 | 0.404 |
| hypoxia_3wks | -2.333 | -1.655 |
| hypoxia_6wks | -0.451 | -1.625 |
| glycerol | -2.028 | 0.313 |
| cholesterol | -1.607 | -0.676 |
| AJ | -0.852 | 0.096 |
| Bibs02 | -3.04 | 1.766 |
| Bibs02c | -0.749 | -1.605 |
| BL6 | 1.636 | 1.144 |
| BL6a | 0.547 | -1.058 |
| BXD01 | -1.47 | 0.534 |
| BXD010 | 0.088 | -0.684 |
| BXD011 | 0.133 | -0.977 |
| BXD03 | 0.758 | -0.388 |
| BXD04 | -0.388 | -0.845 |
| BXD05 | -0.61 | 0.347 |
| BXD06 | -1.64 | -0.623 |
| BXD07 | -1.73 | 0.883 |
| BXD08 | -0.643 | 0.467 |
| BXD09 | -0.847 | -0.122 |
| CAST | 0.614 | -0.307 |
| CCcont | 0.457 | 1.891 |
| DS01 | -1.167 | -0.678 |
| DS02 | -1.237 | 1.068 |
| DS04 | -1.561 | 0.953 |
| DS0c | -0.607 | -1.158 |
| GP01 | 1.169 | 0.986 |
| GP02 | 0.881 | -0.388 |
| GP0c | 0.488 | 0.248 |
| NOD | -1.38 | -0.905 |
| NZO | -1.871 | -1.065 |
| PWK | -1.115 | -1.189 |
| H37Rv_KO_CtpC | 0.848 | -0.558 |
| H37Rv_KO_CtpD | 1.613 | 2.726 |
| H37Rv_KO_Rv1272 | 0.113 | -0.753 |
| H37Rv_KO_SugABC | 2.251 | -0.677 |
| H37Rv_KO_MbtN | 0.41 | -0.296 |
| Trans05 | 0.976 | -1.121 |
| macrophage_unactivated | -0.988 | 0.234 |
| IL1 | -0.833 | -2.337 |
| Rapamycin | -1.132 | -2.418 |
| Tcell | -0.811 | 1.098 |
| GMCSF | -1.663 | -2.445 |
| IFNab | 0.106 | -2.382 |
| IFNg | -0.583 | -2.475 |
| IFNg_GMCSF1 | -1.728 | -2.476 |
| Rv1432_day32 | -0.608 | -0.18 |
| Rv1565c_day32 | -1.275 | -0.706 |
| secA2_input | -0.332 | 0.0 |
| delta_Rv3594 | 1.253 | 2.213 |
| delta_Rv3717 | 0.978 | 1.562 |
| delta_Rv3811 | 1.254 | 1.487 |
| delta_Rv0954 | 1.215 | 0.311 |
| PonA1 | 1.588 | -0.159 |
| EccD1_KO | 1.408 | 0.697 |
| EspI_KO | 1.152 | 0.605 |
| PE35_KO | -0.23 | 1.779 |
| PPE68_KO | 0.061 | 1.789 |
| glycerol2 | 2.081 | 3.845 |
| lignocerate | 3.315 | 3.444 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 3.084 | 3.37 |
| acetate | 4.414 | 3.661 |
| glucAc | 4.344 | 3.26 |
| Rv0950ko | 0.211 | -2.433 |
| Rv1096ko | -0.808 | -2.021 |
| Rv3684ko | -0.626 | -0.573 |
| delta_otsA_trehalose | 0.39 | 0.321 |