Top 10 genes with highest correlation to Rv3217c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.6087) | info on Rv3208A/TB9.4 |
| Rv2212/- | (cc=0.5643) | info on Rv2212/- |
| Rv1103c/mazE3 | (cc=0.5539) | info on Rv1103c/mazE3 |
| Rv2019/- | (cc=0.5449) | info on Rv2019/- |
| Rv2613c/- | (cc=0.539) | info on Rv2613c/- |
| Rv2960c/- | (cc=0.5323) | info on Rv2960c/- |
| Rv2219/- | (cc=0.5315) | info on Rv2219/- |
| Rv1987/- | (cc=0.5293) | info on Rv1987/- |
| Rv2237/- | (cc=0.5208) | info on Rv2237/- |
| Rv2240c/- | (cc=0.5203) | info on Rv2240c/- |
Correlation of Rv3217c/- with Rv3208A/TB9.4
Normalized LFCs for Rv3217c/-:
(description and provenance of datasets)
| Rv3217c/- | Rv3208A/TB9.4 | |
| Fe_supp_jason_reseq | 1.552 | 2.398 |
| low_pH_jason_reseq | 0.915 | 0.694 |
| NO_jason_reseq | -0.583 | -0.263 |
| B6_jason_reseq | 3.158 | 1.57 |
| MHCII_jason_reseq | -1.442 | 0.929 |
| Isoniazid02 | -0.419 | -0.518 |
| Rifampicin4 | 0.338 | 0.826 |
| Ethambutol3 | 0.015 | 2.476 |
| Meropenem3 | 0.393 | 0.126 |
| Vancomycin16 | 0.417 | 0.783 |
| Rv2680_day32 | -2.096 | 0.442 |
| H37Rv_KO_MarP | 0.151 | 1.016 |
| hypoxia_3wks | -2.333 | -1.882 |
| hypoxia_6wks | -0.451 | -1.633 |
| glycerol | -2.028 | 0.549 |
| cholesterol | -1.607 | 0.952 |
| AJ | -0.852 | -1.264 |
| Bibs02 | -3.04 | -0.898 |
| Bibs02c | -0.749 | 0.887 |
| BL6 | 1.636 | -0.948 |
| BL6a | 0.547 | 1.267 |
| BXD01 | -1.47 | -0.479 |
| BXD010 | 0.088 | -1.775 |
| BXD011 | 0.133 | -0.226 |
| BXD03 | 0.758 | -1.273 |
| BXD04 | -0.388 | -1.268 |
| BXD05 | -0.61 | -1.38 |
| BXD06 | -1.64 | -0.967 |
| BXD07 | -1.73 | -1.096 |
| BXD08 | -0.643 | -1.688 |
| BXD09 | -0.847 | -1.267 |
| CAST | 0.614 | -1.255 |
| CCcont | 0.457 | 1.69 |
| DS01 | -1.167 | -0.71 |
| DS02 | -1.237 | -0.607 |
| DS04 | -1.561 | -0.76 |
| DS0c | -0.607 | 0.267 |
| GP01 | 1.169 | 0.559 |
| GP02 | 0.881 | -0.603 |
| GP0c | 0.488 | 0.796 |
| NOD | -1.38 | 0.877 |
| NZO | -1.871 | 0.217 |
| PWK | -1.115 | -0.816 |
| H37Rv_KO_CtpC | 0.848 | 0.421 |
| H37Rv_KO_CtpD | 1.613 | 0.509 |
| H37Rv_KO_Rv1272 | 0.113 | 1.508 |
| H37Rv_KO_SugABC | 2.251 | 1.283 |
| H37Rv_KO_MbtN | 0.41 | -1.428 |
| Trans05 | 0.976 | 1.464 |
| macrophage_unactivated | -0.988 | -0.316 |
| IL1 | -0.833 | -2.029 |
| Rapamycin | -1.132 | -0.988 |
| Tcell | -0.811 | -0.215 |
| GMCSF | -1.663 | -0.544 |
| IFNab | 0.106 | -0.2 |
| IFNg | -0.583 | -1.438 |
| IFNg_GMCSF1 | -1.728 | -2.85 |
| Rv1432_day32 | -0.608 | -0.314 |
| Rv1565c_day32 | -1.275 | 2.132 |
| secA2_input | -0.332 | -2.134 |
| delta_Rv3594 | 1.253 | 3.706 |
| delta_Rv3717 | 0.978 | 2.44 |
| delta_Rv3811 | 1.254 | 2.235 |
| delta_Rv0954 | 1.215 | 2.571 |
| PonA1 | 1.588 | 0.794 |
| EccD1_KO | 1.408 | 0.52 |
| EspI_KO | 1.152 | 0.821 |
| PE35_KO | -0.23 | 1.12 |
| PPE68_KO | 0.061 | 2.259 |
| glycerol2 | 2.081 | 3.174 |
| lignocerate | 3.315 | 2.649 |
| oleate | 0.0 | -2.12 |
| phosphatidylcholine | 3.084 | 2.465 |
| acetate | 4.414 | 4.178 |
| glucAc | 4.344 | 3.653 |
| Rv0950ko | 0.211 | -1.167 |
| Rv1096ko | -0.808 | -0.585 |
| Rv3684ko | -0.626 | 0.802 |
| delta_otsA_trehalose | 0.39 | 0.955 |