Top 10 genes with highest correlation to Rv3207c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1836c/- | (cc=0.7859) | info on Rv1836c/- |
| Rv2190c/- | (cc=0.7377) | info on Rv2190c/- |
| Rv2363/amiA2 | (cc=0.6777) | info on Rv2363/amiA2 |
| Rv2553c/- | (cc=0.6759) | info on Rv2553c/- |
| Rv0950c/- | (cc=0.6704) | info on Rv0950c/- |
| Rv3101c/ftsX | (cc=0.6634) | info on Rv3101c/ftsX |
| Rv1821/secA2 | (cc=0.6602) | info on Rv1821/secA2 |
| Rv1006/- | (cc=0.6584) | info on Rv1006/- |
| Rv1159/pimE | (cc=0.6403) | info on Rv1159/pimE |
| Rv1566c/- | (cc=0.64) | info on Rv1566c/- |
Correlation of Rv3207c/- with Rv2363/amiA2
Normalized LFCs for Rv3207c/-:
(description and provenance of datasets)
| Rv3207c/- | Rv2363/amiA2 | |
| Fe_supp_jason_reseq | 2.441 | 2.878 |
| low_pH_jason_reseq | -0.415 | -0.634 |
| NO_jason_reseq | -3.783 | -0.633 |
| B6_jason_reseq | -1.385 | -0.421 |
| MHCII_jason_reseq | 0.141 | 1.355 |
| Isoniazid02 | -1.224 | -2.015 |
| Rifampicin4 | -2.989 | -5.334 |
| Ethambutol3 | -0.546 | 0.556 |
| Meropenem3 | -0.283 | -2.857 |
| Vancomycin16 | -3.783 | -3.892 |
| Rv2680_day32 | 0.095 | -0.89 |
| H37Rv_KO_MarP | -5.574 | -3.586 |
| hypoxia_3wks | -2.759 | -0.989 |
| hypoxia_6wks | -3.101 | -1.934 |
| glycerol | 0.325 | 1.138 |
| cholesterol | 1.336 | 1.12 |
| AJ | -0.324 | -0.373 |
| Bibs02 | -0.775 | 1.658 |
| Bibs02c | -1.341 | 2.025 |
| BL6 | 0.292 | 0.119 |
| BL6a | 0.244 | 0.739 |
| BXD01 | 0.729 | -0.136 |
| BXD010 | -0.179 | 0.062 |
| BXD011 | 0.464 | -0.133 |
| BXD03 | 0.45 | -1.048 |
| BXD04 | -0.113 | -0.723 |
| BXD05 | 0.49 | -0.14 |
| BXD06 | 0.996 | -0.669 |
| BXD07 | 0.223 | -0.144 |
| BXD08 | -0.564 | 0.297 |
| BXD09 | 1.049 | -0.31 |
| CAST | -0.976 | -1.155 |
| CCcont | 2.818 | 2.288 |
| DS01 | -0.216 | 0.431 |
| DS02 | 1.045 | 1.226 |
| DS04 | 0.384 | -0.202 |
| DS0c | 0.652 | 1.677 |
| GP01 | 0.818 | 0.26 |
| GP02 | 0.638 | -0.486 |
| GP0c | -0.317 | 0.485 |
| NOD | -0.099 | -0.789 |
| NZO | -0.98 | -0.845 |
| PWK | -0.706 | -1.147 |
| H37Rv_KO_CtpC | 1.212 | 1.007 |
| H37Rv_KO_CtpD | 0.997 | 0.819 |
| H37Rv_KO_Rv1272 | 1.863 | 0.134 |
| H37Rv_KO_SugABC | 1.078 | 0.918 |
| H37Rv_KO_MbtN | 0.893 | 0.61 |
| Trans05 | 0.393 | 0.698 |
| macrophage_unactivated | 1.635 | 2.468 |
| IL1 | -0.86 | -0.356 |
| Rapamycin | 0.196 | 0.0 |
| Tcell | -0.691 | -1.29 |
| GMCSF | 1.428 | -0.156 |
| IFNab | 1.351 | 1.076 |
| IFNg | 0.492 | -0.861 |
| IFNg_GMCSF1 | 0.842 | 0.349 |
| Rv1432_day32 | 1.623 | -0.13 |
| Rv1565c_day32 | 0.218 | 1.164 |
| secA2_input | -1.027 | -0.178 |
| delta_Rv3594 | 0.344 | 1.465 |
| delta_Rv3717 | -0.098 | 1.31 |
| delta_Rv3811 | 0.315 | 1.487 |
| delta_Rv0954 | -1.018 | 1.2 |
| PonA1 | -0.416 | 0.238 |
| EccD1_KO | 0.648 | -0.592 |
| EspI_KO | 0.893 | 0.553 |
| PE35_KO | -0.968 | 0.793 |
| PPE68_KO | 0.266 | 1.264 |
| glycerol2 | 0.254 | 0.189 |
| lignocerate | -0.392 | 0.856 |
| oleate | -0.829 | 0.116 |
| phosphatidylcholine | -0.626 | -0.253 |
| acetate | 1.225 | 0.924 |
| glucAc | 0.572 | 0.217 |
| Rv0950ko | -5.5 | -3.54 |
| Rv1096ko | -0.335 | -1.858 |
| Rv3684ko | 0.783 | 1.408 |
| delta_otsA_trehalose | -0.052 | 0.648 |