Top 10 genes with highest correlation to Rv3207c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1836c/- | (cc=0.7859) | info on Rv1836c/- |
| Rv2190c/- | (cc=0.7377) | info on Rv2190c/- |
| Rv2363/amiA2 | (cc=0.6777) | info on Rv2363/amiA2 |
| Rv2553c/- | (cc=0.6759) | info on Rv2553c/- |
| Rv0950c/- | (cc=0.6704) | info on Rv0950c/- |
| Rv3101c/ftsX | (cc=0.6634) | info on Rv3101c/ftsX |
| Rv1821/secA2 | (cc=0.6602) | info on Rv1821/secA2 |
| Rv1006/- | (cc=0.6584) | info on Rv1006/- |
| Rv1159/pimE | (cc=0.6403) | info on Rv1159/pimE |
| Rv1566c/- | (cc=0.64) | info on Rv1566c/- |
Correlation of Rv3207c/- with Rv1836c/-
Normalized LFCs for Rv3207c/-:
(description and provenance of datasets)
| Rv3207c/- | Rv1836c/- | |
| Fe_supp_jason_reseq | 2.441 | 3.703 |
| low_pH_jason_reseq | -0.415 | -0.44 |
| NO_jason_reseq | -3.783 | -0.69 |
| B6_jason_reseq | -1.385 | -0.292 |
| MHCII_jason_reseq | 0.141 | 0.492 |
| Isoniazid02 | -1.224 | -2.187 |
| Rifampicin4 | -2.989 | -2.943 |
| Ethambutol3 | -0.546 | -1.216 |
| Meropenem3 | -0.283 | -1.533 |
| Vancomycin16 | -3.783 | -2.653 |
| Rv2680_day32 | 0.095 | 1.226 |
| H37Rv_KO_MarP | -5.574 | -6.0 |
| hypoxia_3wks | -2.759 | -0.961 |
| hypoxia_6wks | -3.101 | -0.503 |
| glycerol | 0.325 | -0.202 |
| cholesterol | 1.336 | 0.253 |
| AJ | -0.324 | -0.232 |
| Bibs02 | -0.775 | -0.183 |
| Bibs02c | -1.341 | -0.209 |
| BL6 | 0.292 | 1.02 |
| BL6a | 0.244 | 1.339 |
| BXD01 | 0.729 | 1.272 |
| BXD010 | -0.179 | 0.323 |
| BXD011 | 0.464 | 1.988 |
| BXD03 | 0.45 | 0.341 |
| BXD04 | -0.113 | 0.563 |
| BXD05 | 0.49 | 1.21 |
| BXD06 | 0.996 | 0.523 |
| BXD07 | 0.223 | 0.865 |
| BXD08 | -0.564 | 1.248 |
| BXD09 | 1.049 | 0.95 |
| CAST | -0.976 | 0.21 |
| CCcont | 2.818 | 2.888 |
| DS01 | -0.216 | -0.236 |
| DS02 | 1.045 | -0.217 |
| DS04 | 0.384 | 0.883 |
| DS0c | 0.652 | 0.0 |
| GP01 | 0.818 | 0.964 |
| GP02 | 0.638 | 1.165 |
| GP0c | -0.317 | 1.002 |
| NOD | -0.099 | -0.225 |
| NZO | -0.98 | -0.199 |
| PWK | -0.706 | -0.196 |
| H37Rv_KO_CtpC | 1.212 | 0.739 |
| H37Rv_KO_CtpD | 0.997 | 0.918 |
| H37Rv_KO_Rv1272 | 1.863 | 0.953 |
| H37Rv_KO_SugABC | 1.078 | 1.362 |
| H37Rv_KO_MbtN | 0.893 | 1.116 |
| Trans05 | 0.393 | 1.066 |
| macrophage_unactivated | 1.635 | 0.669 |
| IL1 | -0.86 | 0.0 |
| Rapamycin | 0.196 | 0.227 |
| Tcell | -0.691 | 0.0 |
| GMCSF | 1.428 | 0.38 |
| IFNab | 1.351 | 1.844 |
| IFNg | 0.492 | 1.058 |
| IFNg_GMCSF1 | 0.842 | 0.452 |
| Rv1432_day32 | 1.623 | 1.748 |
| Rv1565c_day32 | 0.218 | 0.0 |
| secA2_input | -1.027 | -2.174 |
| delta_Rv3594 | 0.344 | 2.695 |
| delta_Rv3717 | -0.098 | 3.555 |
| delta_Rv3811 | 0.315 | 2.842 |
| delta_Rv0954 | -1.018 | -1.461 |
| PonA1 | -0.416 | -1.387 |
| EccD1_KO | 0.648 | 0.148 |
| EspI_KO | 0.893 | -0.051 |
| PE35_KO | -0.968 | -1.496 |
| PPE68_KO | 0.266 | 0.0 |
| glycerol2 | 0.254 | -0.193 |
| lignocerate | -0.392 | -0.168 |
| oleate | -0.829 | -0.196 |
| phosphatidylcholine | -0.626 | -0.193 |
| acetate | 1.225 | 0.0 |
| glucAc | 0.572 | -0.143 |
| Rv0950ko | -5.5 | -6.0 |
| Rv1096ko | -0.335 | -0.03 |
| Rv3684ko | 0.783 | 1.677 |
| delta_otsA_trehalose | -0.052 | -0.288 |