Top 10 genes with highest correlation to Rv3176c/mesT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0235c/- | (cc=0.5412) | info on Rv0235c/- |
| Rv1526c/- | (cc=0.5322) | info on Rv1526c/- |
| Rv2730/- | (cc=0.5017) | info on Rv2730/- |
| Rv1051c/- | (cc=0.4928) | info on Rv1051c/- |
| Rv1548c/PPE21 | (cc=0.4823) | info on Rv1548c/PPE21 |
| Rv0742/PE_PGRS8 | (cc=0.4789) | info on Rv0742/PE_PGRS8 |
| Rv1753c/PPE24 | (cc=0.4691) | info on Rv1753c/PPE24 |
| Rv3836/- | (cc=0.4678) | info on Rv3836/- |
| Rv0354c/PPE7 | (cc=0.4668) | info on Rv0354c/PPE7 |
| Rv3050c/- | (cc=0.4603) | info on Rv3050c/- |
Correlation of Rv3176c/mesT with Rv3050c/-
Normalized LFCs for Rv3176c/mesT:
(description and provenance of datasets)
| Rv3176c/mesT | Rv3050c/- | |
| Fe_supp_jason_reseq | -0.336 | -1.053 |
| low_pH_jason_reseq | 0.391 | 1.193 |
| NO_jason_reseq | 0.583 | 0.522 |
| B6_jason_reseq | -0.721 | -2.547 |
| MHCII_jason_reseq | -0.592 | -1.955 |
| Isoniazid02 | -0.589 | -0.063 |
| Rifampicin4 | -0.39 | -2.594 |
| Ethambutol3 | -0.204 | -0.612 |
| Meropenem3 | -0.744 | -0.918 |
| Vancomycin16 | -0.6 | -1.496 |
| Rv2680_day32 | 0.521 | 1.932 |
| H37Rv_KO_MarP | 0.608 | 0.906 |
| hypoxia_3wks | 0.399 | 1.611 |
| hypoxia_6wks | -0.672 | 2.7 |
| glycerol | 0.544 | 1.104 |
| cholesterol | 0.662 | -0.098 |
| AJ | 0.474 | 0.541 |
| Bibs02 | 0.605 | 0.115 |
| Bibs02c | -1.234 | 0.258 |
| BL6 | 1.063 | 2.934 |
| BL6a | 0.684 | 4.475 |
| BXD01 | 0.663 | 3.241 |
| BXD010 | 0.424 | 3.787 |
| BXD011 | 1.035 | 5.572 |
| BXD03 | 0.6 | 3.365 |
| BXD04 | 0.409 | 2.343 |
| BXD05 | 0.405 | 3.473 |
| BXD06 | 1.316 | 3.983 |
| BXD07 | 1.398 | 3.042 |
| BXD08 | 1.056 | 3.65 |
| BXD09 | 0.733 | 4.687 |
| CAST | 0.796 | -0.501 |
| CCcont | 1.05 | 2.452 |
| DS01 | 1.016 | -0.926 |
| DS02 | 1.024 | -0.852 |
| DS04 | 0.363 | 2.503 |
| DS0c | -0.284 | 0.616 |
| GP01 | 1.134 | 3.843 |
| GP02 | 1.321 | 1.738 |
| GP0c | 1.501 | 3.849 |
| NOD | -0.63 | -0.151 |
| NZO | 0.6 | -0.433 |
| PWK | -0.124 | -0.274 |
| H37Rv_KO_CtpC | 1.001 | 1.177 |
| H37Rv_KO_CtpD | -0.389 | 1.634 |
| H37Rv_KO_Rv1272 | 1.826 | 3.492 |
| H37Rv_KO_SugABC | 1.559 | 4.142 |
| H37Rv_KO_MbtN | -0.209 | 2.344 |
| Trans05 | 1.509 | 4.016 |
| macrophage_unactivated | 0.426 | 0.063 |
| IL1 | 0.442 | 0.291 |
| Rapamycin | 0.669 | 1.019 |
| Tcell | 0.485 | 2.255 |
| GMCSF | 1.199 | -0.573 |
| IFNab | 0.184 | 0.599 |
| IFNg | 0.51 | -1.227 |
| IFNg_GMCSF1 | 0.468 | -0.61 |
| Rv1432_day32 | 1.229 | 5.592 |
| Rv1565c_day32 | -1.21 | 0.458 |
| secA2_input | 0.593 | 0.321 |
| delta_Rv3594 | 0.393 | 1.42 |
| delta_Rv3717 | 0.305 | 3.259 |
| delta_Rv3811 | 1.054 | 0.932 |
| delta_Rv0954 | 1.337 | -1.765 |
| PonA1 | 0.592 | -1.855 |
| EccD1_KO | -0.947 | -2.072 |
| EspI_KO | -0.918 | -3.274 |
| PE35_KO | 0.63 | -1.613 |
| PPE68_KO | 0.95 | -1.261 |
| glycerol2 | -0.025 | -3.636 |
| lignocerate | 0.6 | -2.568 |
| oleate | -0.299 | -3.374 |
| phosphatidylcholine | 0.235 | -3.892 |
| acetate | 1.26 | -1.584 |
| glucAc | 1.006 | -0.723 |
| Rv0950ko | -0.416 | -0.874 |
| Rv1096ko | -0.078 | -1.384 |
| Rv3684ko | -0.357 | 1.952 |
| delta_otsA_trehalose | -0.608 | -0.519 |