Top 10 genes with highest correlation to Rv3163c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3038c/- | (cc=0.5798) | info on Rv3038c/- |
| Rv2232/ptkA | (cc=0.5631) | info on Rv2232/ptkA |
| Rv0456A/mazF1 | (cc=0.562) | info on Rv0456A/mazF1 |
| Rv0894/- | (cc=0.5533) | info on Rv0894/- |
| Rv3344c/PE_PGRS49 | (cc=0.5445) | info on Rv3344c/PE_PGRS49 |
| Rv1734c/- | (cc=0.5313) | info on Rv1734c/- |
| Rv2287/yjcE | (cc=0.5311) | info on Rv2287/yjcE |
| Rv0578c/PE_PGRS7 | (cc=0.5128) | info on Rv0578c/PE_PGRS7 |
| Rv0297/PE_PGRS5 | (cc=0.4959) | info on Rv0297/PE_PGRS5 |
| Rv3724A/cut5a | (cc=0.4886) | info on Rv3724A/cut5a |
Correlation of Rv3163c/- with Rv3038c/-
Normalized LFCs for Rv3163c/-:
(description and provenance of datasets)
| Rv3163c/- | Rv3038c/- | |
| Fe_supp_jason_reseq | -0.385 | -0.923 |
| low_pH_jason_reseq | -0.325 | 0.694 |
| NO_jason_reseq | -0.113 | 1.712 |
| B6_jason_reseq | -0.465 | 1.289 |
| MHCII_jason_reseq | 0.309 | 1.357 |
| Isoniazid02 | -0.217 | 0.383 |
| Rifampicin4 | -0.214 | 0.374 |
| Ethambutol3 | 0.275 | 0.168 |
| Meropenem3 | 0.932 | 0.315 |
| Vancomycin16 | -0.175 | 0.698 |
| Rv2680_day32 | 1.318 | 0.0 |
| H37Rv_KO_MarP | 0.071 | 0.214 |
| hypoxia_3wks | 0.403 | 1.388 |
| hypoxia_6wks | 0.035 | 1.034 |
| glycerol | 0.62 | 1.69 |
| cholesterol | -0.188 | 0.703 |
| AJ | 0.118 | 1.126 |
| Bibs02 | -0.507 | 1.142 |
| Bibs02c | 0.336 | -0.564 |
| BL6 | -0.497 | -1.031 |
| BL6a | -0.053 | -0.416 |
| BXD01 | 0.709 | 0.593 |
| BXD010 | -0.081 | -1.056 |
| BXD011 | -0.591 | -0.602 |
| BXD03 | -0.591 | -1.115 |
| BXD04 | -1.105 | -0.333 |
| BXD05 | 0.256 | -0.065 |
| BXD06 | -0.213 | -0.535 |
| BXD07 | 0.082 | 0.0 |
| BXD08 | 0.849 | 0.899 |
| BXD09 | -0.313 | -1.018 |
| CAST | -0.102 | 0.0 |
| CCcont | 0.089 | -1.082 |
| DS01 | 0.741 | 1.283 |
| DS02 | 0.35 | 2.28 |
| DS04 | 0.208 | 0.822 |
| DS0c | 0.366 | 1.354 |
| GP01 | -0.157 | 0.387 |
| GP02 | 0.96 | 2.435 |
| GP0c | -0.812 | 0.173 |
| NOD | -0.475 | -0.605 |
| NZO | -0.259 | 0.348 |
| PWK | 0.226 | 0.419 |
| H37Rv_KO_CtpC | 0.274 | -0.249 |
| H37Rv_KO_CtpD | 0.389 | -0.061 |
| H37Rv_KO_Rv1272 | 0.012 | -0.775 |
| H37Rv_KO_SugABC | 0.579 | -0.718 |
| H37Rv_KO_MbtN | 0.555 | 0.137 |
| Trans05 | -1.041 | -1.077 |
| macrophage_unactivated | 0.331 | -0.338 |
| IL1 | -1.655 | -1.032 |
| Rapamycin | -1.301 | -1.488 |
| Tcell | -0.717 | -0.349 |
| GMCSF | -0.842 | -1.281 |
| IFNab | -0.762 | -1.466 |
| IFNg | -1.654 | -1.296 |
| IFNg_GMCSF1 | -0.496 | -1.093 |
| Rv1432_day32 | 0.832 | 0.799 |
| Rv1565c_day32 | 0.327 | 0.0 |
| secA2_input | -0.564 | -0.438 |
| delta_Rv3594 | 0.795 | 1.037 |
| delta_Rv3717 | 0.467 | 1.735 |
| delta_Rv3811 | 0.376 | 1.966 |
| delta_Rv0954 | -0.137 | 0.99 |
| PonA1 | 0.819 | 1.458 |
| EccD1_KO | 0.234 | 0.257 |
| EspI_KO | 0.0 | 0.0 |
| PE35_KO | 0.945 | 1.383 |
| PPE68_KO | 1.008 | 0.928 |
| glycerol2 | 0.122 | -0.263 |
| lignocerate | -0.441 | -0.983 |
| oleate | 0.481 | 0.61 |
| phosphatidylcholine | 0.115 | 0.0 |
| acetate | -0.712 | -1.814 |
| glucAc | 0.006 | -2.228 |
| Rv0950ko | 0.537 | 0.748 |
| Rv1096ko | 0.335 | 0.513 |
| Rv3684ko | 0.612 | -0.305 |
| delta_otsA_trehalose | 0.429 | 0.991 |