Top 10 genes with highest correlation to Rv3149/nuoE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3146/nuoB | (cc=0.7667) | info on Rv3146/nuoB |
| Rv3145/nuoA | (cc=0.7109) | info on Rv3145/nuoA |
| Rv3156/nuoL | (cc=0.6936) | info on Rv3156/nuoL |
| Rv3150/nuoF | (cc=0.6897) | info on Rv3150/nuoF |
| Rv3153/nuoI | (cc=0.6855) | info on Rv3153/nuoI |
| Rv3148/nuoD | (cc=0.6849) | info on Rv3148/nuoD |
| Rv3152/nuoH | (cc=0.6704) | info on Rv3152/nuoH |
| Rv3158/nuoN | (cc=0.6458) | info on Rv3158/nuoN |
| Rv1604/impA | (cc=0.5737) | info on Rv1604/impA |
| Rv3232c/ppk2 | (cc=0.5585) | info on Rv3232c/ppk2 |
Correlation of Rv3149/nuoE with Rv3156/nuoL
Normalized LFCs for Rv3149/nuoE:
(description and provenance of datasets)
| Rv3149/nuoE | Rv3156/nuoL | |
| Fe_supp_jason_reseq | -1.402 | -0.41 |
| low_pH_jason_reseq | -1.064 | -1.186 |
| NO_jason_reseq | -0.528 | 0.0 |
| B6_jason_reseq | -1.568 | -0.787 |
| MHCII_jason_reseq | -2.33 | -0.544 |
| Isoniazid02 | -0.32 | -1.825 |
| Rifampicin4 | 0.032 | 1.021 |
| Ethambutol3 | -0.711 | -0.621 |
| Meropenem3 | -0.701 | -0.673 |
| Vancomycin16 | -0.621 | -0.223 |
| Rv2680_day32 | -0.885 | -0.524 |
| H37Rv_KO_MarP | -1.12 | -0.387 |
| hypoxia_3wks | 0.925 | 1.3 |
| hypoxia_6wks | 0.198 | 0.205 |
| glycerol | 1.071 | -0.234 |
| cholesterol | -0.088 | -0.898 |
| AJ | -0.141 | -0.269 |
| Bibs02 | -1.436 | 0.873 |
| Bibs02c | 0.159 | 1.105 |
| BL6 | 2.19 | 1.47 |
| BL6a | 1.474 | 1.808 |
| BXD01 | 2.417 | 1.047 |
| BXD010 | 1.666 | 1.308 |
| BXD011 | 1.142 | 1.707 |
| BXD03 | 1.47 | 1.502 |
| BXD04 | 1.491 | 0.693 |
| BXD05 | 0.836 | 1.772 |
| BXD06 | 1.894 | 1.533 |
| BXD07 | 2.279 | 1.371 |
| BXD08 | 1.832 | 1.052 |
| BXD09 | 1.852 | 1.346 |
| CAST | 1.165 | 0.123 |
| CCcont | 1.4 | 0.861 |
| DS01 | 0.857 | 1.169 |
| DS02 | 0.356 | 1.453 |
| DS04 | -0.332 | 1.703 |
| DS0c | 2.772 | 1.285 |
| GP01 | 1.761 | 1.605 |
| GP02 | -0.068 | 1.171 |
| GP0c | 2.305 | 1.551 |
| NOD | 1.692 | 0.867 |
| NZO | 0.327 | -0.055 |
| PWK | 0.112 | -0.29 |
| H37Rv_KO_CtpC | 1.549 | 1.177 |
| H37Rv_KO_CtpD | 1.511 | 2.074 |
| H37Rv_KO_Rv1272 | 3.235 | 1.498 |
| H37Rv_KO_SugABC | 1.555 | 2.384 |
| H37Rv_KO_MbtN | 1.725 | 0.829 |
| Trans05 | 1.465 | 1.208 |
| macrophage_unactivated | -0.524 | -0.316 |
| IL1 | -0.893 | 0.0 |
| Rapamycin | -0.402 | -0.15 |
| Tcell | 0.264 | -0.267 |
| GMCSF | -1.801 | -0.309 |
| IFNab | -0.363 | 0.097 |
| IFNg | -1.203 | 0.126 |
| IFNg_GMCSF1 | -0.066 | -0.314 |
| Rv1432_day32 | -0.008 | 0.134 |
| Rv1565c_day32 | 0.218 | -0.038 |
| secA2_input | -0.632 | -0.565 |
| delta_Rv3594 | 0.424 | 0.087 |
| delta_Rv3717 | -0.053 | 0.269 |
| delta_Rv3811 | 0.462 | -0.149 |
| delta_Rv0954 | 0.632 | 0.211 |
| PonA1 | 0.748 | 0.044 |
| EccD1_KO | 0.191 | -1.02 |
| EspI_KO | -1.098 | -0.884 |
| PE35_KO | -0.365 | -0.33 |
| PPE68_KO | 0.246 | -0.118 |
| glycerol2 | 3.017 | 1.914 |
| lignocerate | 0.38 | -0.852 |
| oleate | 3.021 | 2.375 |
| phosphatidylcholine | 0.598 | -0.744 |
| acetate | 0.944 | 0.572 |
| glucAc | 1.293 | 0.163 |
| Rv0950ko | 1.484 | 0.422 |
| Rv1096ko | 2.63 | 0.636 |
| Rv3684ko | 1.287 | 0.537 |
| delta_otsA_trehalose | -0.032 | 1.21 |