Top 10 genes with highest correlation to Rv3149/nuoE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3146/nuoB | (cc=0.7667) | info on Rv3146/nuoB |
| Rv3145/nuoA | (cc=0.7109) | info on Rv3145/nuoA |
| Rv3156/nuoL | (cc=0.6936) | info on Rv3156/nuoL |
| Rv3150/nuoF | (cc=0.6897) | info on Rv3150/nuoF |
| Rv3153/nuoI | (cc=0.6855) | info on Rv3153/nuoI |
| Rv3148/nuoD | (cc=0.6849) | info on Rv3148/nuoD |
| Rv3152/nuoH | (cc=0.6704) | info on Rv3152/nuoH |
| Rv3158/nuoN | (cc=0.6458) | info on Rv3158/nuoN |
| Rv1604/impA | (cc=0.5737) | info on Rv1604/impA |
| Rv3232c/ppk2 | (cc=0.5585) | info on Rv3232c/ppk2 |
Correlation of Rv3149/nuoE with Rv3146/nuoB
Normalized LFCs for Rv3149/nuoE:
(description and provenance of datasets)
| Rv3149/nuoE | Rv3146/nuoB | |
| Fe_supp_jason_reseq | -1.402 | -1.318 |
| low_pH_jason_reseq | -1.064 | -0.895 |
| NO_jason_reseq | -0.528 | -0.63 |
| B6_jason_reseq | -1.568 | -2.02 |
| MHCII_jason_reseq | -2.33 | -2.204 |
| Isoniazid02 | -0.32 | -0.303 |
| Rifampicin4 | 0.032 | 0.533 |
| Ethambutol3 | -0.711 | 1.094 |
| Meropenem3 | -0.701 | -0.944 |
| Vancomycin16 | -0.621 | 0.0 |
| Rv2680_day32 | -0.885 | 2.143 |
| H37Rv_KO_MarP | -1.12 | -0.08 |
| hypoxia_3wks | 0.925 | 1.228 |
| hypoxia_6wks | 0.198 | 0.528 |
| glycerol | 1.071 | 0.669 |
| cholesterol | -0.088 | 0.246 |
| AJ | -0.141 | -0.913 |
| Bibs02 | -1.436 | -2.215 |
| Bibs02c | 0.159 | -0.887 |
| BL6 | 2.19 | 2.686 |
| BL6a | 1.474 | 3.008 |
| BXD01 | 2.417 | 3.298 |
| BXD010 | 1.666 | 3.288 |
| BXD011 | 1.142 | 2.568 |
| BXD03 | 1.47 | 2.99 |
| BXD04 | 1.491 | 2.919 |
| BXD05 | 0.836 | 3.2 |
| BXD06 | 1.894 | 2.98 |
| BXD07 | 2.279 | 3.309 |
| BXD08 | 1.832 | 3.323 |
| BXD09 | 1.852 | 3.314 |
| CAST | 1.165 | 0.829 |
| CCcont | 1.4 | 1.842 |
| DS01 | 0.857 | -0.202 |
| DS02 | 0.356 | -0.285 |
| DS04 | -0.332 | 0.727 |
| DS0c | 2.772 | 0.443 |
| GP01 | 1.761 | 1.199 |
| GP02 | -0.068 | 0.444 |
| GP0c | 2.305 | 2.314 |
| NOD | 1.692 | 0.381 |
| NZO | 0.327 | 0.118 |
| PWK | 0.112 | 0.155 |
| H37Rv_KO_CtpC | 1.549 | 2.112 |
| H37Rv_KO_CtpD | 1.511 | 3.386 |
| H37Rv_KO_Rv1272 | 3.235 | 2.5 |
| H37Rv_KO_SugABC | 1.555 | 2.905 |
| H37Rv_KO_MbtN | 1.725 | 3.496 |
| Trans05 | 1.465 | 1.803 |
| macrophage_unactivated | -0.524 | -0.196 |
| IL1 | -0.893 | -0.32 |
| Rapamycin | -0.402 | -0.454 |
| Tcell | 0.264 | -0.202 |
| GMCSF | -1.801 | -0.536 |
| IFNab | -0.363 | 1.288 |
| IFNg | -1.203 | -0.016 |
| IFNg_GMCSF1 | -0.066 | -0.487 |
| Rv1432_day32 | -0.008 | -0.314 |
| Rv1565c_day32 | 0.218 | -0.058 |
| secA2_input | -0.632 | -1.083 |
| delta_Rv3594 | 0.424 | 0.268 |
| delta_Rv3717 | -0.053 | 0.409 |
| delta_Rv3811 | 0.462 | -0.44 |
| delta_Rv0954 | 0.632 | 0.735 |
| PonA1 | 0.748 | 0.202 |
| EccD1_KO | 0.191 | -0.783 |
| EspI_KO | -1.098 | 0.137 |
| PE35_KO | -0.365 | 0.0 |
| PPE68_KO | 0.246 | 0.301 |
| glycerol2 | 3.017 | 2.655 |
| lignocerate | 0.38 | -0.298 |
| oleate | 3.021 | 3.194 |
| phosphatidylcholine | 0.598 | -0.199 |
| acetate | 0.944 | 0.037 |
| glucAc | 1.293 | 0.62 |
| Rv0950ko | 1.484 | 1.236 |
| Rv1096ko | 2.63 | 1.318 |
| Rv3684ko | 1.287 | 0.491 |
| delta_otsA_trehalose | -0.032 | 0.503 |