Top 10 genes with highest correlation to Rv3107c/agpS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0271c/fadE6 | (cc=0.4933) | info on Rv0271c/fadE6 |
| Rv0196/- | (cc=0.4923) | info on Rv0196/- |
| Rv3655c/- | (cc=0.4621) | info on Rv3655c/- |
| Rv2103c/vapC37 | (cc=0.4588) | info on Rv2103c/vapC37 |
| Rv3728/- | (cc=0.4507) | info on Rv3728/- |
| Rv0233/nrdB | (cc=0.4342) | info on Rv0233/nrdB |
| Rv2626c/hrp1 | (cc=0.429) | info on Rv2626c/hrp1 |
| Rv0764c/cyp51 | (cc=0.4217) | info on Rv0764c/cyp51 |
| Rv3440c/- | (cc=0.4173) | info on Rv3440c/- |
| Rv3485c/- | (cc=0.4169) | info on Rv3485c/- |
Correlation of Rv3107c/agpS with Rv3728/-
Normalized LFCs for Rv3107c/agpS:
(description and provenance of datasets)
| Rv3107c/agpS | Rv3728/- | |
| Fe_supp_jason_reseq | -0.019 | 0.68 |
| low_pH_jason_reseq | -0.02 | -0.478 |
| NO_jason_reseq | -0.501 | -0.572 |
| B6_jason_reseq | 0.427 | 0.13 |
| MHCII_jason_reseq | 0.48 | 0.462 |
| Isoniazid02 | 0.23 | -0.061 |
| Rifampicin4 | -0.211 | 0.382 |
| Ethambutol3 | 0.551 | 1.589 |
| Meropenem3 | -0.173 | 0.133 |
| Vancomycin16 | 0.348 | 0.042 |
| Rv2680_day32 | -0.706 | -0.102 |
| H37Rv_KO_MarP | -0.15 | 0.083 |
| hypoxia_3wks | 0.451 | -0.1 |
| hypoxia_6wks | 0.044 | -0.351 |
| glycerol | -0.919 | 0.01 |
| cholesterol | -0.356 | -0.09 |
| AJ | 0.047 | 0.114 |
| Bibs02 | 0.605 | 0.142 |
| Bibs02c | -0.802 | 0.052 |
| BL6 | -0.396 | -0.071 |
| BL6a | -0.702 | -0.466 |
| BXD01 | -0.232 | -0.52 |
| BXD010 | -0.393 | -0.157 |
| BXD011 | -0.514 | -1.145 |
| BXD03 | -0.814 | -0.362 |
| BXD04 | -0.838 | -0.11 |
| BXD05 | -0.135 | -0.369 |
| BXD06 | -0.622 | -1.036 |
| BXD07 | -0.768 | -0.702 |
| BXD08 | -0.801 | -0.155 |
| BXD09 | -0.639 | -0.821 |
| CAST | 0.609 | 0.113 |
| CCcont | -1.113 | -0.077 |
| DS01 | 0.746 | 0.139 |
| DS02 | -0.03 | 0.699 |
| DS04 | 0.708 | 0.521 |
| DS0c | 0.456 | 0.591 |
| GP01 | 0.346 | 0.202 |
| GP02 | -0.462 | -0.186 |
| GP0c | -0.511 | 0.395 |
| NOD | 0.133 | -0.011 |
| NZO | 0.63 | -0.134 |
| PWK | 0.252 | -0.175 |
| H37Rv_KO_CtpC | 0.033 | -0.084 |
| H37Rv_KO_CtpD | 0.193 | 0.421 |
| H37Rv_KO_Rv1272 | 0.066 | -0.369 |
| H37Rv_KO_SugABC | 1.149 | 0.456 |
| H37Rv_KO_MbtN | -0.827 | 0.154 |
| Trans05 | -0.064 | 0.463 |
| macrophage_unactivated | -0.092 | 0.186 |
| IL1 | -0.178 | -0.208 |
| Rapamycin | 0.703 | -0.16 |
| Tcell | -0.293 | -0.345 |
| GMCSF | -0.04 | -0.209 |
| IFNab | 0.172 | -0.051 |
| IFNg | -0.16 | -0.358 |
| IFNg_GMCSF1 | 0.757 | 0.107 |
| Rv1432_day32 | 0.335 | 0.207 |
| Rv1565c_day32 | 0.867 | 0.199 |
| secA2_input | 0.471 | 0.656 |
| delta_Rv3594 | -0.641 | -0.266 |
| delta_Rv3717 | -0.463 | -0.364 |
| delta_Rv3811 | 0.0 | -0.294 |
| delta_Rv0954 | -0.195 | 0.032 |
| PonA1 | -1.263 | -0.215 |
| EccD1_KO | -1.5 | -0.161 |
| EspI_KO | -1.146 | -0.436 |
| PE35_KO | 0.193 | 0.085 |
| PPE68_KO | -0.266 | -0.336 |
| glycerol2 | 0.095 | 0.135 |
| lignocerate | -0.323 | 0.257 |
| oleate | 0.4 | 0.275 |
| phosphatidylcholine | 0.171 | 0.259 |
| acetate | -0.243 | 0.16 |
| glucAc | -0.952 | -0.031 |
| Rv0950ko | 0.274 | 0.096 |
| Rv1096ko | 0.32 | -0.133 |
| Rv3684ko | 0.151 | -0.432 |
| delta_otsA_trehalose | -0.375 | 0.184 |