Top 10 genes with highest correlation to Rv3104c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1128c/- | (cc=0.4738) | info on Rv1128c/- |
| Rv1752/- | (cc=0.4619) | info on Rv1752/- |
| Rv0778/cyp126 | (cc=0.4422) | info on Rv0778/cyp126 |
| Rv0587/yrbE2A | (cc=0.4378) | info on Rv0587/yrbE2A |
| Rv3857c/- | (cc=0.4356) | info on Rv3857c/- |
| Rv3779/- | (cc=0.4352) | info on Rv3779/- |
| Rv1533/- | (cc=0.434) | info on Rv1533/- |
| Rv2824c/- | (cc=0.4263) | info on Rv2824c/- |
| Rv0380c/- | (cc=0.4129) | info on Rv0380c/- |
| Rv0619/galTb | (cc=0.4119) | info on Rv0619/galTb |
Correlation of Rv3104c/- with Rv3779/-
Normalized LFCs for Rv3104c/-:
(description and provenance of datasets)
| Rv3104c/- | Rv3779/- | |
| Fe_supp_jason_reseq | 1.44 | 0.208 |
| low_pH_jason_reseq | -0.574 | 0.811 |
| NO_jason_reseq | -0.704 | 0.911 |
| B6_jason_reseq | -0.434 | -1.404 |
| MHCII_jason_reseq | 0.884 | -3.086 |
| Isoniazid02 | 0.127 | -0.071 |
| Rifampicin4 | 0.192 | -0.95 |
| Ethambutol3 | -0.592 | -1.407 |
| Meropenem3 | 0.458 | -1.922 |
| Vancomycin16 | -0.175 | -6.0 |
| Rv2680_day32 | -0.354 | -1.114 |
| H37Rv_KO_MarP | 0.765 | -1.199 |
| hypoxia_3wks | 1.188 | 3.086 |
| hypoxia_6wks | 1.566 | 3.184 |
| glycerol | 0.278 | -0.748 |
| cholesterol | -0.34 | -1.569 |
| AJ | -0.445 | -0.832 |
| Bibs02 | -0.16 | -1.519 |
| Bibs02c | -0.42 | -2.122 |
| BL6 | 0.101 | -0.391 |
| BL6a | 0.344 | -1.013 |
| BXD01 | 0.493 | 0.106 |
| BXD010 | 0.367 | 0.114 |
| BXD011 | 0.358 | 0.532 |
| BXD03 | 0.073 | 0.668 |
| BXD04 | 1.237 | 0.041 |
| BXD05 | 1.169 | 0.305 |
| BXD06 | 0.24 | 0.087 |
| BXD07 | 0.855 | 0.524 |
| BXD08 | 0.73 | 0.699 |
| BXD09 | 0.447 | -0.036 |
| CAST | -0.384 | -2.139 |
| CCcont | 0.608 | 0.984 |
| DS01 | -0.226 | -2.986 |
| DS02 | 0.287 | -1.112 |
| DS04 | -0.829 | -1.882 |
| DS0c | 0.679 | -2.349 |
| GP01 | -0.313 | -0.051 |
| GP02 | -0.321 | -0.349 |
| GP0c | 0.359 | 0.492 |
| NOD | 0.905 | -0.26 |
| NZO | 0.027 | -0.288 |
| PWK | 0.081 | -1.202 |
| H37Rv_KO_CtpC | 0.723 | -0.971 |
| H37Rv_KO_CtpD | 1.029 | -0.563 |
| H37Rv_KO_Rv1272 | -0.168 | -0.177 |
| H37Rv_KO_SugABC | 0.33 | -0.367 |
| H37Rv_KO_MbtN | 0.11 | -0.472 |
| Trans05 | 0.131 | 0.365 |
| macrophage_unactivated | 0.464 | -0.12 |
| IL1 | 0.768 | 1.302 |
| Rapamycin | 1.467 | 0.313 |
| Tcell | 0.652 | 0.684 |
| GMCSF | 0.409 | 0.554 |
| IFNab | 0.348 | -0.747 |
| IFNg | 0.35 | -0.021 |
| IFNg_GMCSF1 | 0.606 | -0.119 |
| Rv1432_day32 | 0.789 | -1.516 |
| Rv1565c_day32 | -1.671 | -2.183 |
| secA2_input | 0.611 | -0.348 |
| delta_Rv3594 | 0.211 | 0.173 |
| delta_Rv3717 | 0.0 | -0.047 |
| delta_Rv3811 | -0.126 | 0.149 |
| delta_Rv0954 | 0.981 | 0.346 |
| PonA1 | 0.233 | -0.317 |
| EccD1_KO | -0.927 | -1.269 |
| EspI_KO | 0.063 | -1.58 |
| PE35_KO | -0.747 | -1.575 |
| PPE68_KO | -0.682 | -1.638 |
| glycerol2 | -0.46 | -0.05 |
| lignocerate | -0.342 | -2.635 |
| oleate | -0.323 | -1.401 |
| phosphatidylcholine | -0.287 | -1.91 |
| acetate | -0.642 | -0.229 |
| glucAc | -0.365 | -0.089 |
| Rv0950ko | 0.582 | 0.986 |
| Rv1096ko | 0.431 | 1.23 |
| Rv3684ko | 0.422 | 1.336 |
| delta_otsA_trehalose | -1.37 | -0.85 |