Top 10 genes with highest correlation to Rv3099c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.6357) | info on Rv2430c/PPE41 |
| Rv1059/- | (cc=0.6092) | info on Rv1059/- |
| Rv3150/nuoF | (cc=0.5788) | info on Rv3150/nuoF |
| Rv3151/nuoG | (cc=0.5783) | info on Rv3151/nuoG |
| Rv1831/- | (cc=0.5731) | info on Rv1831/- |
| Rv3050c/- | (cc=0.5688) | info on Rv3050c/- |
| Rv2735c/- | (cc=0.5612) | info on Rv2735c/- |
| Rv3694c/- | (cc=0.5589) | info on Rv3694c/- |
| Rv2584c/apt | (cc=0.5579) | info on Rv2584c/apt |
| Rv0246/- | (cc=0.5553) | info on Rv0246/- |
Correlation of Rv3099c/- with Rv2430c/PPE41
Normalized LFCs for Rv3099c/-:
(description and provenance of datasets)
| Rv3099c/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | 0.429 | -0.259 |
| low_pH_jason_reseq | 0.248 | -0.617 |
| NO_jason_reseq | 0.69 | -0.326 |
| B6_jason_reseq | -0.373 | -0.565 |
| MHCII_jason_reseq | -1.044 | -1.222 |
| Isoniazid02 | -0.493 | -0.362 |
| Rifampicin4 | -0.276 | -0.379 |
| Ethambutol3 | -0.056 | -0.539 |
| Meropenem3 | -0.122 | 0.604 |
| Vancomycin16 | 0.119 | -0.541 |
| Rv2680_day32 | -0.169 | -0.546 |
| H37Rv_KO_MarP | -0.806 | 0.78 |
| hypoxia_3wks | 0.263 | -0.016 |
| hypoxia_6wks | -0.311 | -0.558 |
| glycerol | -0.824 | -1.482 |
| cholesterol | -2.421 | -0.355 |
| AJ | 0.188 | 1.329 |
| Bibs02 | -1.021 | 0.293 |
| Bibs02c | 0.994 | -0.441 |
| BL6 | 1.812 | 2.014 |
| BL6a | 1.372 | 1.624 |
| BXD01 | 0.971 | 1.73 |
| BXD010 | 1.313 | 2.268 |
| BXD011 | 1.081 | 2.003 |
| BXD03 | 1.662 | 2.085 |
| BXD04 | 1.988 | 2.116 |
| BXD05 | 1.222 | 2.269 |
| BXD06 | 1.336 | 1.836 |
| BXD07 | 1.257 | 1.829 |
| BXD08 | 1.656 | 1.59 |
| BXD09 | 1.495 | 1.891 |
| CAST | -0.31 | 1.024 |
| CCcont | 1.195 | 1.659 |
| DS01 | -0.855 | 1.092 |
| DS02 | -0.6 | 0.558 |
| DS04 | 1.096 | 0.769 |
| DS0c | 0.511 | 0.509 |
| GP01 | -0.17 | 0.134 |
| GP02 | 1.275 | 2.462 |
| GP0c | -0.239 | 0.343 |
| NOD | -0.652 | 1.447 |
| NZO | 0.143 | 0.483 |
| PWK | 1.293 | 0.872 |
| H37Rv_KO_CtpC | 0.927 | 0.914 |
| H37Rv_KO_CtpD | 0.232 | 1.252 |
| H37Rv_KO_Rv1272 | 0.563 | 1.399 |
| H37Rv_KO_SugABC | 2.301 | 1.91 |
| H37Rv_KO_MbtN | -0.329 | 1.129 |
| Trans05 | 1.313 | 2.226 |
| macrophage_unactivated | 1.515 | 1.076 |
| IL1 | 0.43 | 0.125 |
| Rapamycin | 0.583 | 0.19 |
| Tcell | 0.59 | 0.094 |
| GMCSF | -0.425 | 0.636 |
| IFNab | 1.082 | 0.308 |
| IFNg | 0.027 | 0.537 |
| IFNg_GMCSF1 | 1.483 | 0.688 |
| Rv1432_day32 | 1.031 | -0.428 |
| Rv1565c_day32 | -0.049 | 0.782 |
| secA2_input | -0.787 | -0.891 |
| delta_Rv3594 | 0.696 | -0.571 |
| delta_Rv3717 | 0.512 | -1.178 |
| delta_Rv3811 | -1.129 | -0.265 |
| delta_Rv0954 | -0.842 | -1.172 |
| PonA1 | 0.278 | -0.066 |
| EccD1_KO | -0.756 | -0.625 |
| EspI_KO | -0.268 | -0.331 |
| PE35_KO | -0.995 | -0.726 |
| PPE68_KO | -1.216 | -0.701 |
| glycerol2 | -0.146 | -0.084 |
| lignocerate | -0.134 | -0.073 |
| oleate | 0.539 | 0.234 |
| phosphatidylcholine | 0.192 | 0.041 |
| acetate | -0.643 | 0.017 |
| glucAc | -0.566 | -0.627 |
| Rv0950ko | -0.63 | -0.136 |
| Rv1096ko | -0.603 | -0.22 |
| Rv3684ko | 0.259 | -0.508 |
| delta_otsA_trehalose | -0.608 | 1.428 |