Top 10 genes with highest correlation to Rv3092c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3076/- | (cc=0.4927) | info on Rv3076/- |
| Rv3198A/- | (cc=0.4866) | info on Rv3198A/- |
| Rv2453c/mobA | (cc=0.4619) | info on Rv2453c/mobA |
| Rv2579/dhaA | (cc=0.4456) | info on Rv2579/dhaA |
| Rv1040c/PE8 | (cc=0.4283) | info on Rv1040c/PE8 |
| Rv0566c/- | (cc=0.4271) | info on Rv0566c/- |
| Rv2300c/- | (cc=0.4259) | info on Rv2300c/- |
| Rv2770c/PPE44 | (cc=0.4236) | info on Rv2770c/PPE44 |
| Rv2879c/- | (cc=0.4148) | info on Rv2879c/- |
| Rv1162/narH | (cc=0.4103) | info on Rv1162/narH |
Correlation of Rv3092c/- with Rv3076/-
Normalized LFCs for Rv3092c/-:
(description and provenance of datasets)
| Rv3092c/- | Rv3076/- | |
| Fe_supp_jason_reseq | -0.603 | -1.953 |
| low_pH_jason_reseq | -0.619 | -1.307 |
| NO_jason_reseq | -0.186 | 0.223 |
| B6_jason_reseq | 0.108 | -0.578 |
| MHCII_jason_reseq | -0.022 | -1.963 |
| Isoniazid02 | 1.461 | 0.949 |
| Rifampicin4 | -0.368 | -0.114 |
| Ethambutol3 | 0.653 | 0.916 |
| Meropenem3 | 0.298 | -0.325 |
| Vancomycin16 | 0.223 | -0.403 |
| Rv2680_day32 | -1.456 | -0.725 |
| H37Rv_KO_MarP | -0.027 | -0.159 |
| hypoxia_3wks | -0.327 | 0.339 |
| hypoxia_6wks | -0.303 | -0.106 |
| glycerol | -1.181 | -2.481 |
| cholesterol | -0.622 | -1.547 |
| AJ | 0.059 | 0.419 |
| Bibs02 | -0.004 | 0.682 |
| Bibs02c | 0.767 | 0.709 |
| BL6 | -0.075 | -2.221 |
| BL6a | 0.594 | 0.548 |
| BXD01 | -0.069 | -0.183 |
| BXD010 | -0.159 | -2.116 |
| BXD011 | -0.574 | -2.105 |
| BXD03 | 0.197 | -1.16 |
| BXD04 | 0.222 | -0.66 |
| BXD05 | 0.01 | -0.179 |
| BXD06 | -0.08 | -0.975 |
| BXD07 | 0.022 | -1.305 |
| BXD08 | 0.496 | 0.24 |
| BXD09 | -0.253 | -0.736 |
| CAST | 0.245 | 0.133 |
| CCcont | -0.166 | -1.281 |
| DS01 | 0.055 | -0.072 |
| DS02 | 0.095 | -0.458 |
| DS04 | 1.226 | 0.124 |
| DS0c | 0.423 | 0.863 |
| GP01 | 0.084 | -1.122 |
| GP02 | 0.128 | -1.125 |
| GP0c | 0.311 | 0.202 |
| NOD | -0.096 | -1.09 |
| NZO | 0.157 | 1.246 |
| PWK | -0.227 | -0.171 |
| H37Rv_KO_CtpC | -0.258 | -1.762 |
| H37Rv_KO_CtpD | 0.364 | -2.209 |
| H37Rv_KO_Rv1272 | 0.077 | -1.846 |
| H37Rv_KO_SugABC | -0.21 | 0.769 |
| H37Rv_KO_MbtN | -0.128 | -1.83 |
| Trans05 | -0.318 | -3.354 |
| macrophage_unactivated | 0.657 | -0.06 |
| IL1 | 0.647 | -0.418 |
| Rapamycin | 0.881 | 0.448 |
| Tcell | 0.779 | -0.326 |
| GMCSF | 0.28 | 0.05 |
| IFNab | 0.795 | 0.747 |
| IFNg | 0.81 | -0.492 |
| IFNg_GMCSF1 | 0.126 | 1.213 |
| Rv1432_day32 | 0.549 | 0.301 |
| Rv1565c_day32 | 0.077 | 0.599 |
| secA2_input | -0.019 | -0.131 |
| delta_Rv3594 | -0.805 | -2.213 |
| delta_Rv3717 | -0.141 | -0.243 |
| delta_Rv3811 | -0.669 | -0.98 |
| delta_Rv0954 | -0.216 | -2.406 |
| PonA1 | 0.252 | 0.908 |
| EccD1_KO | 0.51 | 0.753 |
| EspI_KO | 0.225 | -0.419 |
| PE35_KO | 0.149 | -2.211 |
| PPE68_KO | 0.291 | -0.87 |
| glycerol2 | 0.478 | -0.289 |
| lignocerate | 1.055 | -0.237 |
| oleate | 0.398 | 0.312 |
| phosphatidylcholine | 0.864 | 0.263 |
| acetate | -0.105 | -0.256 |
| glucAc | 0.305 | -1.629 |
| Rv0950ko | 0.492 | 0.669 |
| Rv1096ko | 0.0 | 1.601 |
| Rv3684ko | 0.052 | -0.269 |
| delta_otsA_trehalose | 0.016 | -0.762 |