Top 10 genes with highest correlation to Rv3077/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1726/- | (cc=0.5916) | info on Rv1726/- |
| Rv2679/echA15 | (cc=0.559) | info on Rv2679/echA15 |
| Rv0443/- | (cc=0.532) | info on Rv0443/- |
| Rv2577/- | (cc=0.5229) | info on Rv2577/- |
| Rv3554/fdxB | (cc=0.5059) | info on Rv3554/fdxB |
| Rv0968/- | (cc=0.5049) | info on Rv0968/- |
| Rv3742c/- | (cc=0.4965) | info on Rv3742c/- |
| Rv3506/fadD17 | (cc=0.4948) | info on Rv3506/fadD17 |
| Rv3406/- | (cc=0.4916) | info on Rv3406/- |
| Rv3522/ltp4 | (cc=0.4833) | info on Rv3522/ltp4 |
Correlation of Rv3077/- with Rv3554/fdxB
Normalized LFCs for Rv3077/-:
(description and provenance of datasets)
| Rv3077/- | Rv3554/fdxB | |
| Fe_supp_jason_reseq | -0.412 | -0.306 |
| low_pH_jason_reseq | -0.453 | 0.303 |
| NO_jason_reseq | -0.087 | 0.029 |
| B6_jason_reseq | 0.009 | 0.19 |
| MHCII_jason_reseq | 0.317 | 0.768 |
| Isoniazid02 | -1.193 | -0.604 |
| Rifampicin4 | 0.693 | 0.23 |
| Ethambutol3 | -0.541 | -1.041 |
| Meropenem3 | -0.452 | -0.869 |
| Vancomycin16 | -0.475 | -0.321 |
| Rv2680_day32 | -0.234 | -0.039 |
| H37Rv_KO_MarP | 0.301 | -0.162 |
| hypoxia_3wks | -0.574 | 0.076 |
| hypoxia_6wks | -0.651 | -0.079 |
| glycerol | -0.374 | -0.8 |
| cholesterol | -0.276 | 0.078 |
| AJ | -0.43 | 0.395 |
| Bibs02 | -0.101 | 0.489 |
| Bibs02c | 0.239 | 0.294 |
| BL6 | 0.138 | -0.131 |
| BL6a | -0.274 | -0.276 |
| BXD01 | -0.493 | -0.71 |
| BXD010 | -0.315 | -0.156 |
| BXD011 | -0.064 | -0.46 |
| BXD03 | 0.093 | -0.946 |
| BXD04 | 0.116 | -0.464 |
| BXD05 | -0.106 | -0.257 |
| BXD06 | -0.233 | -0.717 |
| BXD07 | -0.264 | -0.46 |
| BXD08 | -0.253 | -0.527 |
| BXD09 | -0.461 | -0.204 |
| CAST | -0.307 | 0.177 |
| CCcont | -0.367 | -0.778 |
| DS01 | 0.092 | 0.577 |
| DS02 | 0.076 | 0.844 |
| DS04 | 0.564 | 0.8 |
| DS0c | -0.03 | 0.605 |
| GP01 | -0.36 | -0.474 |
| GP02 | 0.753 | 0.829 |
| GP0c | -0.206 | 0.007 |
| NOD | -0.103 | 0.255 |
| NZO | 0.244 | 0.298 |
| PWK | -0.352 | 0.308 |
| H37Rv_KO_CtpC | -0.985 | -1.393 |
| H37Rv_KO_CtpD | 0.41 | 0.416 |
| H37Rv_KO_Rv1272 | 0.0 | 0.083 |
| H37Rv_KO_SugABC | -0.142 | -0.35 |
| H37Rv_KO_MbtN | -0.684 | 0.489 |
| Trans05 | 0.269 | -0.966 |
| macrophage_unactivated | -0.306 | -0.271 |
| IL1 | 0.086 | -0.62 |
| Rapamycin | 0.043 | -0.543 |
| Tcell | -0.472 | -0.681 |
| GMCSF | -0.116 | -0.227 |
| IFNab | -0.248 | -0.729 |
| IFNg | -0.198 | -0.473 |
| IFNg_GMCSF1 | 0.415 | 0.226 |
| Rv1432_day32 | -0.156 | 0.151 |
| Rv1565c_day32 | 0.167 | -0.924 |
| secA2_input | 0.496 | 0.038 |
| delta_Rv3594 | -0.515 | -0.3 |
| delta_Rv3717 | -0.595 | -0.23 |
| delta_Rv3811 | -0.454 | 0.228 |
| delta_Rv0954 | 0.315 | 0.519 |
| PonA1 | 0.307 | 0.295 |
| EccD1_KO | -0.178 | -0.418 |
| EspI_KO | 0.22 | -0.268 |
| PE35_KO | -0.403 | -0.181 |
| PPE68_KO | -0.291 | 0.374 |
| glycerol2 | -0.025 | -0.06 |
| lignocerate | 0.656 | 0.0 |
| oleate | -0.376 | 0.088 |
| phosphatidylcholine | 0.259 | 0.029 |
| acetate | -0.138 | -0.163 |
| glucAc | 0.354 | 0.269 |
| Rv0950ko | 0.386 | 0.187 |
| Rv1096ko | 0.965 | 1.107 |
| Rv3684ko | 0.714 | 0.36 |
| delta_otsA_trehalose | 1.489 | 0.694 |