Top 10 genes with highest correlation to Rv3037c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1323/fadA4 | (cc=0.7003) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.6428) | info on Rv3354/- |
| Rv0325/- | (cc=0.6154) | info on Rv0325/- |
| Rv0433/- | (cc=0.6111) | info on Rv0433/- |
| Rv0228/- | (cc=0.6055) | info on Rv0228/- |
| Rv0621/- | (cc=0.6034) | info on Rv0621/- |
| Rv3062/ligB | (cc=0.5982) | info on Rv3062/ligB |
| Rv0571c/- | (cc=0.5875) | info on Rv0571c/- |
| Rv2859c/- | (cc=0.5797) | info on Rv2859c/- |
| Rv3295/- | (cc=0.5778) | info on Rv3295/- |
Correlation of Rv3037c/- with Rv3062/ligB
Normalized LFCs for Rv3037c/-:
(description and provenance of datasets)
| Rv3037c/- | Rv3062/ligB | |
| Fe_supp_jason_reseq | -0.789 | -0.802 |
| low_pH_jason_reseq | -0.269 | 0.564 |
| NO_jason_reseq | 0.924 | 0.095 |
| B6_jason_reseq | 0.089 | 0.82 |
| MHCII_jason_reseq | -0.464 | 0.271 |
| Isoniazid02 | 1.477 | 0.335 |
| Rifampicin4 | 0.671 | 0.742 |
| Ethambutol3 | 0.248 | 1.569 |
| Meropenem3 | 1.241 | 0.392 |
| Vancomycin16 | 0.263 | 0.783 |
| Rv2680_day32 | 0.011 | 0.986 |
| H37Rv_KO_MarP | 0.693 | 0.899 |
| hypoxia_3wks | -0.072 | 0.415 |
| hypoxia_6wks | -0.722 | 0.455 |
| glycerol | 0.105 | 0.246 |
| cholesterol | -0.073 | -0.068 |
| AJ | -0.755 | -0.624 |
| Bibs02 | -0.23 | 0.046 |
| Bibs02c | -0.626 | -0.203 |
| BL6 | -1.798 | -1.337 |
| BL6a | -1.042 | -1.158 |
| BXD01 | -1.288 | -0.209 |
| BXD010 | -1.181 | -1.165 |
| BXD011 | 0.505 | -1.362 |
| BXD03 | -2.486 | -1.281 |
| BXD04 | -0.827 | 0.025 |
| BXD05 | -1.241 | -1.01 |
| BXD06 | -0.873 | -0.855 |
| BXD07 | -0.791 | -0.372 |
| BXD08 | -1.238 | -1.277 |
| BXD09 | -1.461 | -1.115 |
| CAST | -0.34 | -0.499 |
| CCcont | -1.418 | -1.287 |
| DS01 | 0.072 | -0.087 |
| DS02 | 0.252 | 0.473 |
| DS04 | -0.401 | -0.561 |
| DS0c | -0.2 | 0.57 |
| GP01 | -1.794 | -1.757 |
| GP02 | -0.823 | -0.99 |
| GP0c | -1.286 | -1.506 |
| NOD | -0.719 | -0.348 |
| NZO | -0.659 | -0.309 |
| PWK | -1.044 | -0.328 |
| H37Rv_KO_CtpC | -0.076 | -0.965 |
| H37Rv_KO_CtpD | -0.81 | -1.829 |
| H37Rv_KO_Rv1272 | -0.221 | -1.898 |
| H37Rv_KO_SugABC | -0.721 | -0.266 |
| H37Rv_KO_MbtN | -0.33 | -1.194 |
| Trans05 | -0.148 | -0.478 |
| macrophage_unactivated | -2.093 | -0.436 |
| IL1 | -0.475 | -0.148 |
| Rapamycin | -0.957 | -0.479 |
| Tcell | -0.867 | 0.261 |
| GMCSF | -0.75 | -1.154 |
| IFNab | -0.562 | -1.388 |
| IFNg | 0.313 | -1.35 |
| IFNg_GMCSF1 | 0.346 | 0.201 |
| Rv1432_day32 | 0.249 | 1.035 |
| Rv1565c_day32 | 0.889 | 0.589 |
| secA2_input | 1.212 | -0.279 |
| delta_Rv3594 | 0.597 | 0.078 |
| delta_Rv3717 | 0.62 | -0.17 |
| delta_Rv3811 | 0.217 | -1.071 |
| delta_Rv0954 | 0.82 | -0.034 |
| PonA1 | 0.336 | -0.205 |
| EccD1_KO | 1.016 | 1.072 |
| EspI_KO | 0.856 | -0.268 |
| PE35_KO | 0.475 | -0.108 |
| PPE68_KO | -0.211 | 0.173 |
| glycerol2 | 0.315 | 0.231 |
| lignocerate | 0.582 | 0.309 |
| oleate | 0.319 | 0.432 |
| phosphatidylcholine | 1.301 | 0.473 |
| acetate | -0.055 | -0.253 |
| glucAc | -0.06 | -0.193 |
| Rv0950ko | 0.709 | 1.288 |
| Rv1096ko | 1.013 | 1.927 |
| Rv3684ko | 0.324 | 1.569 |
| delta_otsA_trehalose | 0.405 | -0.11 |