TnSeqCorr

Top 10 genes with highest correlation to Rv3037c/-:

update plotcorrelationlink to info on gene
Rv1323/fadA4 (cc=0.7003) info on Rv1323/fadA4
Rv3354/- (cc=0.6428) info on Rv3354/-
Rv0325/- (cc=0.6154) info on Rv0325/-
Rv0433/- (cc=0.6111) info on Rv0433/-
Rv0228/- (cc=0.6055) info on Rv0228/-
Rv0621/- (cc=0.6034) info on Rv0621/-
Rv3062/ligB (cc=0.5982) info on Rv3062/ligB
Rv0571c/- (cc=0.5875) info on Rv0571c/-
Rv2859c/- (cc=0.5797) info on Rv2859c/-
Rv3295/- (cc=0.5778) info on Rv3295/-

Correlation of Rv3037c/- with Rv1323/fadA4

Normalized LFCs for Rv3037c/-:
(description and provenance of datasets)
Rv3037c/-Rv1323/fadA4
Fe_supp_jason_reseq

-0.789

-0.66

low_pH_jason_reseq

-0.269

0.457

NO_jason_reseq

0.924

-1.097

B6_jason_reseq

0.089

-0.71

MHCII_jason_reseq

-0.464

0.604

Isoniazid02

1.477

1.058

Rifampicin4

0.671

0.425

Ethambutol3

0.248

1.045

Meropenem3

1.241

1.236

Vancomycin16

0.263

0.982

Rv2680_day32

0.011

-0.734

H37Rv_KO_MarP

0.693

0.885

hypoxia_3wks

-0.072

-0.502

hypoxia_6wks

-0.722

-1.462

glycerol

0.105

-0.047

cholesterol

-0.073

0.055

AJ

-0.755

-0.376

Bibs02

-0.23

-0.121

Bibs02c

-0.626

-0.02

BL6

-1.798

-2.727

BL6a

-1.042

-1.342

BXD01

-1.288

-2.864

BXD010

-1.181

-2.137

BXD011

0.505

-3.063

BXD03

-2.486

-2.196

BXD04

-0.827

-2.652

BXD05

-1.241

-2.511

BXD06

-0.873

-2.77

BXD07

-0.791

-2.721

BXD08

-1.238

-3.027

BXD09

-1.461

-2.917

CAST

-0.34

-0.868

CCcont

-1.418

-1.199

DS01

0.072

-0.592

DS02

0.252

-0.121

DS04

-0.401

-1.566

DS0c

-0.2

-0.596

GP01

-1.794

-1.94

GP02

-0.823

-2.603

GP0c

-1.286

-3.04

NOD

-0.719

0.628

NZO

-0.659

-1.753

PWK

-1.044

-0.521

H37Rv_KO_CtpC

-0.076

0.172

H37Rv_KO_CtpD

-0.81

-0.962

H37Rv_KO_Rv1272

-0.221

-2.119

H37Rv_KO_SugABC

-0.721

-0.711

H37Rv_KO_MbtN

-0.33

-1.156

Trans05

-0.148

-1.482

macrophage_unactivated

-2.093

-1.496

IL1

-0.475

-1.062

Rapamycin

-0.957

-1.495

Tcell

-0.867

-0.746

GMCSF

-0.75

-1.545

IFNab

-0.562

-1.433

IFNg

0.313

-1.721

IFNg_GMCSF1

0.346

-0.377

Rv1432_day32

0.249

-0.724

Rv1565c_day32

0.889

0.697

secA2_input

1.212

0.473

delta_Rv3594

0.597

0.34

delta_Rv3717

0.62

-0.313

delta_Rv3811

0.217

0.034

delta_Rv0954

0.82

0.643

PonA1

0.336

0.291

EccD1_KO

1.016

0.421

EspI_KO

0.856

-0.051

PE35_KO

0.475

0.251

PPE68_KO

-0.211

0.275

glycerol2

0.315

0.586

lignocerate

0.582

1.196

oleate

0.319

0.303

phosphatidylcholine

1.301

0.847

acetate

-0.055

0.74

glucAc

-0.06

0.642

Rv0950ko

0.709

0.431

Rv1096ko

1.013

0.676

Rv3684ko

0.324

0.056

delta_otsA_trehalose

0.405

-1.023