Top 10 genes with highest correlation to Rv3036c/TB22.2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.7093) | info on Rv1337/- |
| Rv1333/- | (cc=0.6444) | info on Rv1333/- |
| Rv1496/- | (cc=0.6427) | info on Rv1496/- |
| Rv1336/cysM | (cc=0.6064) | info on Rv1336/cysM |
| Rv2857c/- | (cc=0.5895) | info on Rv2857c/- |
| Rv0545c/pitA | (cc=0.585) | info on Rv0545c/pitA |
| Rv0019c/fhaB | (cc=0.571) | info on Rv0019c/fhaB |
| Rv0153c/ptbB | (cc=0.5659) | info on Rv0153c/ptbB |
| Rv1780/- | (cc=0.5642) | info on Rv1780/- |
| Rv1076/lipU | (cc=0.5613) | info on Rv1076/lipU |
Correlation of Rv3036c/TB22.2 with Rv1336/cysM
Normalized LFCs for Rv3036c/TB22.2:
(description and provenance of datasets)
| Rv3036c/TB22.2 | Rv1336/cysM | |
| Fe_supp_jason_reseq | 0.137 | 0.199 |
| low_pH_jason_reseq | -1.253 | 0.831 |
| NO_jason_reseq | -1.307 | 1.113 |
| B6_jason_reseq | -2.542 | 0.705 |
| MHCII_jason_reseq | -1.684 | -0.079 |
| Isoniazid02 | 0.776 | 1.385 |
| Rifampicin4 | 1.004 | 0.076 |
| Ethambutol3 | 0.579 | -0.593 |
| Meropenem3 | 0.351 | 0.628 |
| Vancomycin16 | 2.194 | 0.666 |
| Rv2680_day32 | 0.849 | 0.675 |
| H37Rv_KO_MarP | 0.207 | -0.425 |
| hypoxia_3wks | 1.595 | 2.213 |
| hypoxia_6wks | 2.359 | 4.042 |
| glycerol | 0.904 | -0.967 |
| cholesterol | 0.569 | 0.048 |
| AJ | -0.798 | -1.56 |
| Bibs02 | -1.537 | -1.444 |
| Bibs02c | -0.517 | -1.203 |
| BL6 | 1.455 | 1.43 |
| BL6a | 1.046 | 1.05 |
| BXD01 | 1.89 | 2.221 |
| BXD010 | 1.676 | 1.974 |
| BXD011 | 0.788 | 3.102 |
| BXD03 | 0.942 | 1.156 |
| BXD04 | 1.202 | 1.994 |
| BXD05 | 2.048 | 1.724 |
| BXD06 | 1.769 | 2.328 |
| BXD07 | 1.603 | 2.6 |
| BXD08 | 0.951 | 2.71 |
| BXD09 | 1.733 | 1.771 |
| CAST | -1.712 | -0.594 |
| CCcont | 1.837 | 0.248 |
| DS01 | -2.084 | -1.632 |
| DS02 | -2.96 | -1.306 |
| DS04 | -0.96 | -0.136 |
| DS0c | -1.455 | -1.194 |
| GP01 | 2.551 | 1.134 |
| GP02 | 1.287 | 0.251 |
| GP0c | 2.192 | 1.595 |
| NOD | -2.4 | -1.128 |
| NZO | -0.764 | 0.23 |
| PWK | -1.12 | -0.469 |
| H37Rv_KO_CtpC | 0.668 | -0.578 |
| H37Rv_KO_CtpD | 0.0 | 0.006 |
| H37Rv_KO_Rv1272 | 2.11 | 1.298 |
| H37Rv_KO_SugABC | 0.408 | 0.836 |
| H37Rv_KO_MbtN | 1.906 | 2.209 |
| Trans05 | 1.468 | 1.733 |
| macrophage_unactivated | 0.082 | -2.061 |
| IL1 | 1.367 | -0.163 |
| Rapamycin | 0.755 | -0.915 |
| Tcell | 0.86 | 0.29 |
| GMCSF | -0.549 | -1.428 |
| IFNab | 1.125 | 0.115 |
| IFNg | 1.267 | -0.901 |
| IFNg_GMCSF1 | 0.283 | -1.024 |
| Rv1432_day32 | 1.551 | 0.846 |
| Rv1565c_day32 | -1.336 | -1.439 |
| secA2_input | 0.667 | 0.227 |
| delta_Rv3594 | 0.701 | 0.858 |
| delta_Rv3717 | 0.888 | 2.129 |
| delta_Rv3811 | 0.72 | 1.103 |
| delta_Rv0954 | -1.557 | -0.291 |
| PonA1 | -1.101 | -0.995 |
| EccD1_KO | -0.02 | 0.22 |
| EspI_KO | 0.26 | 0.088 |
| PE35_KO | -0.105 | -0.715 |
| PPE68_KO | 0.397 | 0.016 |
| glycerol2 | -0.237 | -0.206 |
| lignocerate | -0.356 | -2.133 |
| oleate | 0.047 | 2.606 |
| phosphatidylcholine | 0.035 | -1.732 |
| acetate | 0.439 | -0.073 |
| glucAc | 0.295 | -0.255 |
| Rv0950ko | 0.217 | -0.633 |
| Rv1096ko | -0.452 | -0.305 |
| Rv3684ko | 0.157 | 0.308 |
| delta_otsA_trehalose | -1.082 | -0.053 |