Top 10 genes with highest correlation to Rv3032A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0460/- | (cc=0.405) | info on Rv0460/- |
| Rv0580c/- | (cc=0.4012) | info on Rv0580c/- |
| Rv0613c/- | (cc=0.4007) | info on Rv0613c/- |
| Rv0492c/- | (cc=0.3978) | info on Rv0492c/- |
| Rv0650/- | (cc=0.3947) | info on Rv0650/- |
| Rv2943/- | (cc=0.3907) | info on Rv2943/- |
| Rv2896c/- | (cc=0.3833) | info on Rv2896c/- |
| Rv2803/- | (cc=0.3796) | info on Rv2803/- |
| Rv1368/lprF | (cc=0.3766) | info on Rv1368/lprF |
| Rv1318c/- | (cc=0.3626) | info on Rv1318c/- |
Correlation of Rv3032A/- with Rv0460/-
Normalized LFCs for Rv3032A/-:
(description and provenance of datasets)
| Rv3032A/- | Rv0460/- | |
| Fe_supp_jason_reseq | -1.372 | 0.136 |
| low_pH_jason_reseq | -1.169 | -0.765 |
| NO_jason_reseq | -0.698 | 1.425 |
| B6_jason_reseq | -0.904 | -0.772 |
| MHCII_jason_reseq | 0.135 | 0.379 |
| Isoniazid02 | -0.288 | 0.118 |
| Rifampicin4 | 0.208 | 0.856 |
| Ethambutol3 | 0.282 | 0.358 |
| Meropenem3 | 1.174 | 0.867 |
| Vancomycin16 | 0.172 | -1.011 |
| Rv2680_day32 | 1.038 | -0.121 |
| H37Rv_KO_MarP | 0.696 | 1.335 |
| hypoxia_3wks | 0.207 | 0.108 |
| hypoxia_6wks | -0.958 | 0.0 |
| glycerol | 1.346 | 1.062 |
| cholesterol | 0.988 | 0.321 |
| AJ | -0.182 | 2.649 |
| Bibs02 | -0.629 | 0.034 |
| Bibs02c | 0.108 | -1.399 |
| BL6 | -0.028 | 1.974 |
| BL6a | -0.522 | -0.326 |
| BXD01 | -0.877 | 0.248 |
| BXD010 | 0.937 | 2.069 |
| BXD011 | -0.276 | -0.564 |
| BXD03 | -0.552 | -0.522 |
| BXD04 | -1.547 | 0.33 |
| BXD05 | -0.886 | 1.098 |
| BXD06 | -0.217 | 0.19 |
| BXD07 | -0.287 | 0.448 |
| BXD08 | -1.1 | 0.315 |
| BXD09 | -0.088 | 0.568 |
| CAST | -0.035 | -0.649 |
| CCcont | 0.034 | 1.319 |
| DS01 | 0.438 | -0.091 |
| DS02 | 0.562 | 0.764 |
| DS04 | -0.836 | 0.93 |
| DS0c | -0.204 | -0.899 |
| GP01 | 0.344 | 3.028 |
| GP02 | 0.354 | 1.475 |
| GP0c | 0.521 | 0.785 |
| NOD | -0.659 | -1.422 |
| NZO | 0.504 | 0.442 |
| PWK | -0.202 | 0.374 |
| H37Rv_KO_CtpC | -0.646 | 0.946 |
| H37Rv_KO_CtpD | 1.947 | 2.548 |
| H37Rv_KO_Rv1272 | -1.34 | 0.758 |
| H37Rv_KO_SugABC | -1.554 | -0.949 |
| H37Rv_KO_MbtN | 0.211 | 0.975 |
| Trans05 | -2.518 | -1.381 |
| macrophage_unactivated | -0.338 | 0.514 |
| IL1 | -0.317 | 0.706 |
| Rapamycin | -0.442 | 1.774 |
| Tcell | -0.153 | 1.173 |
| GMCSF | -0.092 | 1.288 |
| IFNab | 0.614 | 2.001 |
| IFNg | 0.238 | 1.804 |
| IFNg_GMCSF1 | -0.575 | 1.769 |
| Rv1432_day32 | 0.823 | 0.201 |
| Rv1565c_day32 | 0.136 | 2.999 |
| secA2_input | 0.321 | 2.453 |
| delta_Rv3594 | -0.402 | -0.451 |
| delta_Rv3717 | -1.057 | -1.144 |
| delta_Rv3811 | -0.886 | -2.014 |
| delta_Rv0954 | -0.43 | -0.908 |
| PonA1 | -2.409 | -0.467 |
| EccD1_KO | -0.125 | -1.848 |
| EspI_KO | -0.953 | -0.493 |
| PE35_KO | -0.42 | -1.301 |
| PPE68_KO | -1.382 | -0.992 |
| glycerol2 | -0.706 | 0.724 |
| lignocerate | -0.258 | -0.023 |
| oleate | -0.442 | -0.109 |
| phosphatidylcholine | -0.419 | 0.14 |
| acetate | -0.888 | 0.166 |
| glucAc | -0.615 | 0.429 |
| Rv0950ko | 2.063 | 1.52 |
| Rv1096ko | 0.464 | 0.449 |
| Rv3684ko | -0.386 | 2.558 |
| delta_otsA_trehalose | -0.632 | 3.444 |