Top 10 genes with highest correlation to Rv3020c/esxS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3398c/idsA1 | (cc=0.5563) | info on Rv3398c/idsA1 |
| Rv1984c/cfp21 | (cc=0.5411) | info on Rv1984c/cfp21 |
| Rv1831/- | (cc=0.5351) | info on Rv1831/- |
| Rv1918c/PPE35 | (cc=0.5215) | info on Rv1918c/PPE35 |
| Rv0647c/- | (cc=0.5091) | info on Rv0647c/- |
| Rv1521/fadD25 | (cc=0.4911) | info on Rv1521/fadD25 |
| Rv1787/PPE25 | (cc=0.4902) | info on Rv1787/PPE25 |
| Rv1949c/- | (cc=0.4875) | info on Rv1949c/- |
| Rv1482c/- | (cc=0.4861) | info on Rv1482c/- |
| Rv2339/mmpL9 | (cc=0.4809) | info on Rv2339/mmpL9 |
Correlation of Rv3020c/esxS with Rv1831/-
Normalized LFCs for Rv3020c/esxS:
(description and provenance of datasets)
| Rv3020c/esxS | Rv1831/- | |
| Fe_supp_jason_reseq | -0.174 | -0.275 |
| low_pH_jason_reseq | -0.077 | -0.952 |
| NO_jason_reseq | -1.436 | -0.68 |
| B6_jason_reseq | -2.341 | -1.36 |
| MHCII_jason_reseq | -1.579 | -0.162 |
| Isoniazid02 | -0.776 | 0.665 |
| Rifampicin4 | 0.222 | -0.531 |
| Ethambutol3 | -0.471 | 1.136 |
| Meropenem3 | 0.086 | 0.271 |
| Vancomycin16 | -0.172 | -0.355 |
| Rv2680_day32 | -0.756 | 0.69 |
| H37Rv_KO_MarP | -0.494 | -0.512 |
| hypoxia_3wks | 0.997 | 0.124 |
| hypoxia_6wks | 1.43 | 1.021 |
| glycerol | -2.85 | -0.11 |
| cholesterol | -0.657 | 0.052 |
| AJ | -1.052 | -0.613 |
| Bibs02 | -2.448 | -1.674 |
| Bibs02c | -0.212 | 0.349 |
| BL6 | -1.966 | 0.796 |
| BL6a | 0.865 | 1.37 |
| BXD01 | 1.258 | 2.036 |
| BXD010 | 1.112 | 0.407 |
| BXD011 | 1.23 | 1.379 |
| BXD03 | -0.226 | 1.217 |
| BXD04 | 0.73 | 1.986 |
| BXD05 | 0.239 | 1.501 |
| BXD06 | 0.531 | 1.635 |
| BXD07 | 0.177 | 1.565 |
| BXD08 | 1.232 | 2.417 |
| BXD09 | 0.718 | 1.261 |
| CAST | 0.332 | -0.087 |
| CCcont | -1.026 | 1.331 |
| DS01 | -0.19 | -0.349 |
| DS02 | 0.457 | -0.487 |
| DS04 | 1.348 | 1.148 |
| DS0c | -0.984 | 0.476 |
| GP01 | 0.297 | -0.413 |
| GP02 | 0.286 | 1.186 |
| GP0c | -0.132 | -0.086 |
| NOD | 0.609 | 1.302 |
| NZO | 0.22 | -1.05 |
| PWK | 0.978 | 0.198 |
| H37Rv_KO_CtpC | 0.71 | 0.72 |
| H37Rv_KO_CtpD | 0.954 | -0.09 |
| H37Rv_KO_Rv1272 | 1.691 | 1.759 |
| H37Rv_KO_SugABC | -0.883 | 1.836 |
| H37Rv_KO_MbtN | 2.472 | 1.611 |
| Trans05 | 1.533 | 1.252 |
| macrophage_unactivated | 1.001 | 0.568 |
| IL1 | 0.377 | -0.083 |
| Rapamycin | -0.503 | -0.439 |
| Tcell | 0.482 | 0.091 |
| GMCSF | 1.022 | 0.314 |
| IFNab | 0.067 | 0.689 |
| IFNg | 1.296 | 0.265 |
| IFNg_GMCSF1 | 1.323 | 0.547 |
| Rv1432_day32 | 1.443 | 1.313 |
| Rv1565c_day32 | 0.0 | -0.471 |
| secA2_input | 1.094 | -0.25 |
| delta_Rv3594 | -1.104 | -0.494 |
| delta_Rv3717 | -0.617 | 0.323 |
| delta_Rv3811 | -0.491 | -0.004 |
| delta_Rv0954 | -2.474 | -0.375 |
| PonA1 | -1.08 | -1.199 |
| EccD1_KO | 0.855 | 0.96 |
| EspI_KO | -0.773 | 0.414 |
| PE35_KO | 0.665 | -0.029 |
| PPE68_KO | 0.061 | 0.106 |
| glycerol2 | -1.344 | -0.263 |
| lignocerate | -1.34 | 0.145 |
| oleate | -0.02 | 0.424 |
| phosphatidylcholine | -0.734 | 0.326 |
| acetate | -1.829 | -0.8 |
| glucAc | -1.868 | -0.318 |
| Rv0950ko | 0.983 | -0.012 |
| Rv1096ko | -1.592 | -0.546 |
| Rv3684ko | -0.976 | -0.193 |
| delta_otsA_trehalose | -1.151 | -2.555 |